Spinacia oleracea (spinach): 110776258
Help
Entry
110776258 CDS
T05137
Name
(RefSeq) sister chromatid cohesion protein SCC2 isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
soe03036
]
110776258
Chromosome and associated proteins [BR:
soe03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
110776258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
PHD
PHD_2
Prok-RING_1
zf-PHD-like
PHD_4
Porphobil_deam
Motif
Other DBs
NCBI-GeneID:
110776258
NCBI-ProteinID:
XP_021836499
UniProt:
A0A9R0JJ54
LinkDB
All DBs
Position
1:54896048..54916370
Genome browser
AA seq
1771 aa
AA seq
DB search
MSNNPSDWSQRGITLSNTLHSEVAPCLPLPSLPPFCGASDEHLRLFDDQLPRLLNRRDIL
AQASKIADLLLHTDVSYLNLKNDVSSVSGSTMAHMDLCEEVLRYSHGAFECTLPGPLEER
ISNVESDQDNYQKNEHVSSQVDGGHGENCDHQHALVVDDAPSSSKRTRIKKKGSQGVSSF
ALPDVGEQRDAMVGRFCDFLEDFCSRAEIPGEEQDESEWLLLPTSDIRMVVKEILSIQEE
NMLHRVPVGFLVKLLKVLDHQIHRAEGLSIDECENSDSDVSSILCALESIHAALAVMAFN
DMPKQLYKEEIIERILEFTRRQVMDVMSACDPSYRALHRPGDNRAAEGEDDQDAEAEFGS
ASKRRRTSKTVKVKRTVANRIPAAVNTVFQKLCTILGLLKDLLLLERLSDSCILQLVKTC
LSTFLVDNIQLLQMKAMSLISGIFYSYTQHRTYVVDEVIQLLWKLPFSKRAARVYHLPDE
EQKQIQMITALLLQLVLHSANLPEALRQKSNNSAIFETIIETNYLIKCNEAATETCVSFW
THVLERLTSKGQEASEVKVILENLVVDLLTTLTLPEYPAASLILEVLCVLLLQNAGPKSK
DVSIRSLAIDILGTIAARLKQESVLCHRDNFWVVQELVGGENVNENEQTDACSVCLDGVV
EKALVVCQGCQRPFHPDCMGVREHDISGRSWQCPCCLCRKQLLVLQSYCTSQLKDDSKKN
RNRSENSPDECASKMEIVQQMLLNYLEDTGSSDDLHLFARWLYLCLWYKDDPKSKQLFSY
RIARLKSKAVIRDSGALSSLLTRDFIKKITLCLGQHNSFSRGFDTILGMLLVSLRDNSPV
IRAKSLRAVSIIVEADPEVLRDKRVQLAVEGRFCDSAISVREAALELVGRHIASHPDVGL
QYFEKVAERIKDTGVSVRKRAIKIIRDMCTSNADFLESAHACIEIISRISDEETSIQDLV
CKTFYEFWFEEPTGRQYFGDDSSVPLEVARKTEQIVNMLRKMPNHQPLVTVIKHNLALDF
LPQSKGTGVNPVLLATVRKRCEMMCKFSLERILQVEEMNTEEGELRILPYVTVLHAFCVV
DPSLCAPASNPSQFVVTLQPYLKNQVDNRVMAQLLESVIFIIDAVLPLLRKLPQSVVEEL
EQDLKQMIVRHSFLTVVHACIKCLCSLNKIAGGKGARLIQFLIQVFVKRLDALGVDNKQQ
VGRSLFCLGLLIRYGSTLLSESNDGVDLGSNIRLFKKYLVADDFGIKVRALQALGFVLIA
RPEYMLEKDIGKILAETLASSCDARLKLQALQNMYDYLLDAESQLGSDTVEDNVVDCSED
GGSVVPVAAGAGDTNICGGIVQLYWNHILERCLDTNEQIRQSSLKIVEVALRQGLVHPIT
CVPYLIALETDPLEVNSKLAHHLLMNMNEKYPAFFESRLGDGLQLSFNFIQSMSENSVNL
NSKTEVKVAENLKGKYEDASFANARIGVSRIYKLIRGNRVSRNKFMSSVIRKFDNPCWRG
KVVPFLMYCAEILALLPFTAPDEPLYLVYTINRVVQVRSGTLEANLKAFSSHFSQRSSQK
DMTENGSICKELPVDSLSASSVTFELNGQVQLPEDGHFHCTSKEENVHTRNIGPRLLTED
DQQRIQAVCLAATALQLLLKLKRHLKIVYNLDDVRCQAFSPAEPPKSGEALSRQNIPFNI
GVTNTNLPSTCEELTQTYQEFKNALREDTVDYSTYTANIKKKRPPSRRGGKPRMVCREDE
DCEDDDEDWTGGGRRYYSVRQSNGVRGSRRL
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaaccctagcgattggagccaaagaggcatcacactctccaatactctacac
tcggaggttgctccatgcttgccgctgccgtctcttccgccgttctgcggtgcttccgat
gagcaccttcggctgttcgatgaccagctccctcggctgttgaaccgccgtgatattctt
gctcaggcttccaaaatcgctgatctccttcttcatactgatgtctcttacttgaatctt
aagaatgatgtgagttcagtttctggttctacaatggcgcatatggatctttgcgaggag
gttcttagatacagtcatggcgcctttgagtgtacacttccaggtcctcttgaagagcga
atctctaatgtggagtctgatcaggacaattatcagaagaatgaacatgtttccagtcaa
gttgacggaggccatggagaaaactgcgatcatcagcatgctcttgttgttgatgatgca
ccttcatcatcaaaaagaactagaattaaaaagaaaggaagccagggagtgtcatctttt
gctttgccagatgtcggtgaacagcgagatgctatggtcgggcgattctgtgattttttg
gaggacttttgtagtagggctgaaattcctggtgaagagcaagatgaatcagagtggttg
ctgttgcctacctctgacattcgtatggttgtgaaggaaatattgtctatccaagaagag
aacatgctacaccgagttcctgtaggttttcttgtgaaactactgaaggttttagaccat
cagattcatcgtgctgaaggcctatcaattgatgaatgtgaaaattcagactctgatgtt
tcatcgattctttgcgctttggagtctattcatgctgctttggctgtaatggcttttaat
gacatgccaaaacaactatataaggaagagattattgagagaatactcgagttcactaga
cgacaggtcatggatgtaatgtcagcttgtgatccttcgtatcgtgctttgcatagacct
ggtgataacagagctgctgaaggggaagatgaccaagatgctgaggccgagtttggttct
gcaagcaaaagacggcgtacaagtaagactgtgaaagtgaaaagaactgtggcaaacagg
attccagctgctgtgaacaccgtgtttcaaaagctttgtactatccttggtcttctgaag
gacctcttgttattggaacgcctctcagacagctgtatcttgcagcttgtcaaaacgtgc
ttgtcaacatttttggttgacaatattcaactattgcaaatgaaggctatgagcctgatc
agtgggattttttattcgtacacacagcataggacttatgttgttgatgaagttattcaa
cttctctggaagctgccattctcaaaacgagctgccagagtgtatcatttaccagatgaa
gagcagaaacagattcaaatgattactgctttattgcttcagttggttctccacagtgct
aatcttcctgaagctttaaggcaaaaatcaaacaatagtgccatctttgaaactataatt
gaaacaaactacctgattaaatgcaacgaggcagccacagagacatgtgtttcattctgg
acacatgttcttgagcggcttacaagtaaaggccaggaggcatctgaagtgaaggtgata
ttggagaatcttgtggtggatttgttaactacattgactctaccagagtaccctgctgct
tccctcattttagaagttctatgtgtcttgttgcttcagaatgctggtccgaaatcaaaa
gatgtttctatacgctctctggccattgatattcttggtacaatcgctgcacggttgaag
caggagtctgttctttgccatagggataacttttgggtagtgcaggagctggtaggtggg
gaaaatgtaaatgagaatgaacagaccgatgcatgttctgtttgcttggatggagtagtt
gaaaaagctcttgtggtatgtcaaggctgtcagagaccatttcatcctgattgtatgggg
gtcagagaacatgacatctctggacgtagttggcagtgcccttgctgtctctgcaggaaa
caacttctagtgttacaatcatactgcacatcacagctcaaggatgatagcaaaaagaat
cgtaaccgttcagaaaattcgcctgatgagtgtgcttcaaaaatggagatcgttcaacag
atgcttcttaattaccttgaggacacagggtcttctgatgatcttcatctctttgcccgc
tggttatatctatgcctctggtacaaagatgatccaaaatctaagcagctgttcagctat
cgcattgccagattgaaatcgaaagcggttattcgtgattcaggggccttgtcatcgttg
ttaaccagagatttcattaaaaagataacgttgtgtctaggacagcataattcattttcc
agaggatttgatactattcttggcatgcttctggttagtctacgagacaattcacctgta
atcagggctaagtcattgcgtgctgttagtataattgtagaagctgatcctgaagtcttg
cgcgataagcgtgttcaacttgctgtcgaaggaaggttttgtgattctgcaatatctgtc
agagaagctgctttggaacttgttggaaggcatattgcatctcatcctgatgttggtttg
caatattttgaaaaggttgctgagagaattaaagacactggggtaagtgtacggaaacga
gcaatcaaaattattcgagacatgtgtacatcaaatgctgattttttggaatctgcacat
gcttgcattgagatcatttctcgtatcagtgatgaagaaacaagtattcaggatcttgtt
tgcaaaacattttacgagttctggtttgaagaacctactgggagacaatattttggagat
gatagttctgtgccattggaggtggctaggaagactgaacagatagttaatatgttaagg
aagatgcctaatcatcaacctcttgtcactgttatcaaacacaatttggctcttgatttc
ttgcctcagtcgaagggaaccggggttaatcctgtattactggcaacagtgcgcaagcgt
tgtgaaatgatgtgcaaattttcactggaaagaattttgcaggtagaggaaatgaacact
gaagaaggtgagttgcggatacttccttatgtgacggttttgcatgctttttgtgttgtg
gatccgtcactctgtgcacctgcttccaatccttcccagtttgttgtcacactgcagccg
tatcttaagaatcaggttgataatcgagttatggcacaacttttggagagtgtcatattt
ataatcgacgctgttctccctctactgcggaagttgcctcaaagtgttgttgaagaactc
gagcaggatctgaagcagatgattgttcgtcattcctttttgacagttgtacatgcttgc
atcaagtgcctgtgctctttgaataaaattgctggtggaaaaggagcaaggttaatacag
tttcttattcaggtgttcgttaaacgtttggatgcccttggtgttgataacaaacagcag
gtgggcagatctttgttctgtctcgggcttctaattcgctatggtagcacccttttgagt
gaatctaatgacggtgtcgatcttggtagcaatatcagattgtttaagaagtatcttgtt
gctgatgattttggtataaaggtcagagctctacaggcactgggctttgttttgattgct
agacctgaatatatgttggagaaggatattggaaaaattttagcagaaacgctggcttcc
agctgtgatgctcgtcttaagctgcaagccttgcaaaatatgtacgattatctccttgac
gctgaaagtcagttggggtcagatacagtggaagataacgtggttgactgctctgaggat
ggtggttctgtcgtgcctgtagctgcaggtgctggtgatactaacatttgtggtggaata
gtgcaactttattggaaccatatcttggaaagatgtttggacacaaatgaacaaattcgg
caatctagcctgaagattgtggaggttgctctgcgccaaggtcttgtacacccaattact
tgtgtcccgtatctcattgccctggaaacagatcctttggaggtgaactcaaagttggcg
catcatctgctaatgaatatgaacgagaagtatccagccttctttgagagccgtctgggt
gatgggctgcagttgtcatttaacttcatacaatcaatgagcgagaattctgtaaatttg
aattctaaaaccgaagtcaaggttgctgaaaatttgaagggaaaatacgaggatgcatcg
tttgctaatgcgagaataggagtttctcgtatatacaagctcatacgcggaaaccgtgtt
tctagaaataagttcatgtcttcagttattcgcaaatttgataatccgtgctggaggggg
aaagttgtccctttcttgatgtattgcgcggaaatccttgctttgctccctttcacagct
cctgatgagcccctttacttggtttacaccataaacagagtggtacaagttagatctgga
acactggaagcaaatctaaaagcattcagttctcatttctcccagcgaagttcacaaaag
gatatgacagaaaatgggagtatttgtaaagagttacctgttgattctctttctgcttct
tctgtaacttttgagttaaatggtcaagttcagttgcctgaggatgggcattttcattgt
acgtcgaaggaagaaaatgtgcacacgagaaacattggacctcgtttgctcacagaagat
gatcagcagagaatacaggctgtctgtcttgcagctactgctcttcagcttctcttaaag
ctgaagaggcacttgaagattgtttacaatttagatgatgtccgatgccaagcattttct
cctgccgaacctcccaaatcgggggaggctctttccagacagaatattccttttaacatt
ggtgtcacaaataccaatttgccttcaacttgtgaagagttgacccaaacatatcaggaa
ttcaagaatgcattgagggaagatacggttgactactcaacctacacggcaaacatcaag
aagaaacgcccaccctctcgaagaggaggcaagccaagaatggtgtgtagggaggatgag
gattgtgaagatgatgatgaagattggacaggcggagggcggaggtattatagtgtccga
caaagcaacggtgttagaggaagcaggcggttatag
DBGET
integrated database retrieval system
