KEGG   Spinacia oleracea (spinach): 110776267
Entry
110776267         CDS       T05137                                 
Name
(RefSeq) protein transport protein SEC13 homolog B
  KO
K14004  protein transport protein SEC13
Organism
soe  Spinacia oleracea (spinach)
Pathway
soe03013  Nucleocytoplasmic transport
soe04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:soe00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110776267
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110776267
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:soe03019]
    110776267
   04131 Membrane trafficking [BR:soe04131]
    110776267
Messenger RNA biogenesis [BR:soe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     110776267
Membrane trafficking [BR:soe04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    110776267
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    110776267
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    110776267
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR35_TULP_N Beta-prop_Vps41 Beta-prop_WDR3_2nd WD40_Gbeta WDR55 Beta-prop_EIPR1 Beta-prop_RIG_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_HPS5 Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_NOL10_N Beta-prop_EML WD40_RFWD3 Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 110776267
NCBI-ProteinID: XP_021836508
UniProt: A0A9R0HTG0
LinkDB
Position
3:88960040..88961834
AA seq 302 aa
MPAQKIETGHSDVVHDVQMDYYGKRVATASSDATIKIIGVGSSSAAQPLATLTGHQGPVW
QVAWAHPKFGSILASCSYDGRVIIWKEGNQNEWAQAHVFHEHKASVNSISWAPYEIGLCL
ACGSSDGSISVFTVRSDGGWETNKIDQAHPVGVTSVSWAPATAPGALVGSGLLEPVHKLV
SGGCDSTVKVWKLYNGTWKMDCFPALQMHSDWVRDVAWAPNLGLPKSTIASASQDGTVVI
WTVGKEGEQWEGKVLKDFKTPVWRVSWSLTGNLLAVADGDNNVTLWKEAVDGEWQQVSTV
EP
NT seq 909 nt   +upstreamnt  +downstreamnt
atgcctgcacaaaagattgaaaccggtcatagtgatgtggttcatgatgttcaaatggat
tattatggaaaacgtgttgccactgcatcgtctgatgccacgattaagataattggtgtg
ggcagtagttcagctgcacagcctcttgctacattgactggccatcaaggccctgtttgg
caggttgcatgggcacacccgaaatttgggtctattcttgcttcgtgttcctatgatggt
agggtgattatatggaaggagggaaatcagaatgagtgggcacaagctcatgtgttccat
gaacacaaagcctcggttaattccatctcttgggcaccttatgaaatagggctgtgtttg
gcttgtggatcgtctgatgggagcatctcggtcttcactgttcgttctgatggtggttgg
gaaaccaacaagattgatcaagctcatcctgttggggtgacatctgtttcgtgggctcca
gcaacagctccaggagctcttgttggatcaggattgctagaacctgttcataaactggtt
tctgggggttgtgatagtaccgtgaaagtgtggaagctttacaatgggacatggaagatg
gactgcttccctgctcttcagatgcactcagattgggtgagagatgtggcttgggctcct
aatctagggcttcctaagtccacaattgctagcgcttcacaggatggaactgtagttata
tggacagtgggcaaagaaggtgagcaatgggagggcaaagttttgaaggacttcaagact
cctgtttggagagtatcttggtctttgacagggaacttgttggccgttgcagatggtgac
aacaatgttacgttgtggaaagaggcggttgatggagagtggcagcaggtttcaacagtg
gaaccatag

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