Spinacia oleracea (spinach): 110776503
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Entry
110776503 CDS
T05137
Name
(RefSeq) cryptochrome-1 isoform X1
KO
K12118
cryptochrome 1
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
110776503
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
110776503
NCBI-ProteinID:
XP_021836782
UniProt:
A0A9R0HTK7
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Position
2:111402023..111407438
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AA seq
679 aa
AA seq
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MVDGCTIVWLRRDLRVEDNPALAAAVRAGSVICVFIWAPEEEGHYYPGRVSRWWLKHSLA
QLDSSLKSLGTCLVTKRSTDSISSLIEILKSTGASQLFFNHLYDPLSLVRDHRAKEVLTA
HGITVRSFNADLLYEPWEVVDETGQPFNTFTSFWERCLSMPFDPEAPLLPPKRIISGDIS
KCPSDTLVFEDDSEKGSNALLARAWSPGWSSADKALTTFVNGPLIEYSENRRKADSATTS
FLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNTAGDESCNLFLKSIGLREYSRYMSFNHP
YSHERPLLGHLKFFPWVVDESYFKAWRQGRTGYPLVDAGMRELWASGWLHDRIRVVVSSF
FVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDGREVDRIDNPQFEGYKFDP
NGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGVELGSNYPLPIVGIDAAKVRLQEAL
TSMWEQEAAYRASIENGTEEGLGDSAEFAPIEFPQDLRMDIDREPARNDNNQNEVNRPRH
EDQMVPSITTTLFRVDDYETSSEVQQHSVGNVRAEVPRNQGVEQSPRRNNNVIPPPQPPR
VNITYGLQNIEIEESTADSSSTSGGSRSSGVVPVWSPSSSTFADQYISDEAGMGQGSSFL
QRHPQSHELVNWRRLSQTG
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggtggatgggtgtacaatagtatggttgaggagggatctaagggtagaagataatcca
gctttagcagcagcagtgagagcaggatcagtaatttgtgtttttatttgggcacctgaa
gaagaaggccattattacccaggaagagtttcaaggtggtggttgaaacatagtttagca
cagcttgattcttctttgaaaagtcttggtacttgtcttgttaccaagagatctactgat
agtatttcctcacttattgagattcttaagtctactggtgcttctcagctcttcttcaat
catttatatgatcctctgtcacttgttagggatcaccgtgcaaaagaagtattaacagca
catggtataaccgtgcgctccttcaatgctgatcttctgtatgaaccatgggaagttgtt
gacgagacaggccaaccgtttaatacctttacttctttctgggaaagatgccttagcatg
ccttttgatcccgaggctccacttcttccacctaagaggataatctctggagatatttcg
aagtgcccatcagacacattggtatttgaagatgattcagaaaaaggaagtaatgcctta
cttgctagagcatggtcacctggttggagcagtgctgataaagctttaaccactttcgtc
aatggacctttgattgaatactcagagaatcgaagaaaggctgatagtgcaacaacctcc
tttctctctcctcaccttcactttggagaggtcagtgtacgaaaggtcttccacctagta
cgcatcaagcaagtctcatgggcaaatgaagggaacacagcaggtgacgagagttgcaat
ttgtttctgaaatcaatcggtttgagagaatactcaagatatatgagctttaaccacccg
tatagccacgagaggcctttacttgggcacctcaagtttttcccgtgggtggtggatgaa
agctacttcaaggcgtggagacaaggtagaacgggttatcctttggttgatgctggtatg
agagagttgtgggcttctggttggctacatgatagaatacgggttgttgtttctagcttc
tttgtgaaggttctgcaacttccatggaggtgggggatgaagtacttctgggataccctt
ttggatgctgatcttgaaagtgatgcccttggctggcaatatataacggggactctccct
gatggccgtgaggttgaccgaatagataatcctcagtttgaaggctacaaattcgatcca
aacggagaatatgtaaggcggtggctcccagaacttgcaaggctaccaacagaatggatc
catcacccatggaatgccccggaatccgtactacaagctgcaggggtagagttagggtca
aattacccacttcccattgtaggaatagatgcagcaaaagtaagactccaagaagcgctt
acaagtatgtgggaacaagaagcagcttacagggcatctattgagaatgggacagaagaa
ggtctcggcgattctgccgaatttgcccctattgaatttcctcaagatttacggatggat
attgatcgtgaacccgcgaggaacgataacaaccaaaatgaggttaaccggccccgtcat
gaggaccagatggtgcctagcatcaccacaaccttgtttagggttgatgattatgaaact
tcttcagaggttcaacaacattcagtgggaaatgtgagagcagaggttccaagaaatcaa
ggggttgaacaatctccaagaagaaataataatgtgattccaccaccacaaccaccacgg
gtaaacatcacgtacgggttgcagaatatagagatagaagagtctacagctgactcatca
agtacttctggtggtagccggagtagtggggtggttcctgtttggtctccttcgagttct
acatttgcagatcagtatattagtgatgaagcgggaatgggacaagggtcctcgtttctg
cagaggcatccacaatcgcacgaactggtgaattggagacggctttctcaaactggttga
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