KEGG   Spinacia oleracea (spinach): 110776932
Entry
110776932         CDS       T05137                                 
Name
(RefSeq) sm-like protein LSM2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
soe  Spinacia oleracea (spinach)
Pathway
soe03018  RNA degradation
soe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:soe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110776932
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110776932
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:soe03019]
    110776932
   03041 Spliceosome [BR:soe03041]
    110776932
Messenger RNA biogenesis [BR:soe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110776932
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     110776932
Spliceosome [BR:soe03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    110776932
 Complex C
  U2 snRNP components
    110776932
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 110776932
NCBI-ProteinID: XP_021837199
UniProt: A0A9R0HWK8
LinkDB
Position
5:1043302..1051526
AA seq 93 aa
MLFFSYFKEIVGREVVVELKNDLAIRGTLRSVDQYLNIKLENTRVVDQEKYPHMLSVRNC
FIRGSVVRYVQLPPDGVDVELLHDATRREARGG
NT seq 282 nt   +upstreamnt  +downstreamnt
atgctattcttctcatatttcaaggaaattgtggggcgtgaagtggttgtggaactgaag
aatgatctagccattagaggaaccctccgttctgttgatcagtacctcaatatcaagctg
gagaacactagggttgttgaccaagaaaagtatcctcacatgttatcagtgaggaactgc
tttataaggggttcagttgtgagatacgttcagttaccgccagatggagttgatgttgag
ttgcttcatgatgccacgagaagagaagctcgaggcggctaa

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