Spinacia oleracea (spinach): 110776932
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Entry
110776932 CDS
T05137
Name
(RefSeq) sm-like protein LSM2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03018
RNA degradation
soe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110776932
09123 Folding, sorting and degradation
03018 RNA degradation
110776932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110776932
03041 Spliceosome [BR:
soe03041
]
110776932
Messenger RNA biogenesis [BR:
soe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110776932
mRNA degradation factors
5'-3' decay
Lsm complex
110776932
Spliceosome [BR:
soe03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
110776932
Complex C
U2 snRNP components
110776932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
110776932
NCBI-ProteinID:
XP_021837199
UniProt:
A0A9R0HWK8
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All DBs
Position
5:1043302..1051526
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AA seq
93 aa
AA seq
DB search
MLFFSYFKEIVGREVVVELKNDLAIRGTLRSVDQYLNIKLENTRVVDQEKYPHMLSVRNC
FIRGSVVRYVQLPPDGVDVELLHDATRREARGG
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgctattcttctcatatttcaaggaaattgtggggcgtgaagtggttgtggaactgaag
aatgatctagccattagaggaaccctccgttctgttgatcagtacctcaatatcaagctg
gagaacactagggttgttgaccaagaaaagtatcctcacatgttatcagtgaggaactgc
tttataaggggttcagttgtgagatacgttcagttaccgccagatggagttgatgttgag
ttgcttcatgatgccacgagaagagaagctcgaggcggctaa
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