Spinacia oleracea (spinach): 110777031
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Entry
110777031 CDS
T05137
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
soe03041
]
110777031
Spliceosome [BR:
soe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110777031
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF4523
Motif
Other DBs
NCBI-GeneID:
110777031
NCBI-ProteinID:
XP_021837317
UniProt:
A0A9R0HUQ6
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All DBs
Position
2:49614263..49622656
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AA seq
449 aa
AA seq
DB search
MSSSGQHQFRYTQTPSKVLHLRNLPWECSEEELVELCKPFGKIVNTKCNVGANRNQAFVE
YADLNQAISMVSYFASASEPAQVRGKTVYIQYSNRHEIVNNKSPGDIPGNVLLVTMEGVQ
PGDVTIEVIHLVFSAFGFVHKIATFEKAAGFQALIQFSDVDTASAAKDALDGRSIPRYLL
LEHVSSCNLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAFEGLAQPVVGADGIKKDQ
ESNVLLAAIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALVQYPDVSTASVAKD
SLEGHCIYDGGYCKLHLTYSRHTDLNVKAHSDKSRDYTVPAVQLSQSYPGAPTAPWMNPQ
PGAGYPSNGYGAGATMPPQTHAAPAPSWDPSMQHGRQAFVSVPSNFPGQTYTSSPMPAYA
SAPISPAPGASMPMTAPGASRVSPSPYYP
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcttccgggcaacatcagtttaggtacacccagacaccgtcgaaggttctccac
ttgcgcaatcttccatgggagtgctccgaagaggagcttgttgagctctgtaaaccattc
ggtaagatcgtcaataccaagtgcaatgtcggcgccaatcggaatcaagcttttgtcgaa
tatgcagaccttaatcaggctatctcaatggtttcgtattttgcgtctgcatccgaaccg
gcccaggtccgtggtaaaaccgtttatattcagtattcgaatagacatgaaatcgtgaac
aataagagccctggtgatattcccgggaatgttttgctagttaccatggaaggagtgcaa
cctggcgacgttaccattgaagttattcacttggttttctcagcctttgggtttgtccac
aaaattgctacatttgaaaaggcagctggatttcaggcgttaattcaattcagtgatgtt
gacacagcaagtgcagcaaaggatgcgttggatggcagaagtatacctaggtatctgctt
ctggaacatgtgagttcatgtaatctacgaatctcatattctgcacatacggacctgaat
attaaatttcaatcgcacaggagcagggactacaccaatccataccttcctgtgaaccct
actgcttttgaaggtcttgctcagcctgttgtaggtgctgatggcattaaaaaagatcag
gagagcaatgtgcttcttgctgcaatcgagaatatgcaatatgctgttacagttgatgtt
cttcatacggtattttctgcttttggcaccgttcaaaagatagcgatatttgagaaaaat
ggccaaacacaggctttggttcagtatcctgatgttagtactgcttctgttgccaaagat
tccttggaaggacattgcatttatgatggtggctattgtaagcttcatctaacatactct
cgtcatactgatctcaatgtaaaggctcatagtgacaaaagtagagattacacagtccca
gcggtccaactgagtcaaagttaccccggagctcctacagcaccatggatgaaccctcaa
cctggcgctggatatccttcaaatggatacggtgctggtgctactatgccgcctcagact
catgcggcacctgcaccctcatgggacccttctatgcagcatggaaggcaagcattcgtt
tctgtgcctagcaattttcctggccaaacatatacatcatctcctatgcctgcgtatgct
tcagctccgatttcaccagcccctggagcttcaatgccgatgactgcaccgggtgcttca
cgggttagcccgtctccatattacccataa
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