Spinacia oleracea (spinach): 110777037
Help
Entry
110777037 CDS
T05137
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
110777037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
soe04121
]
110777037
Ubiquitin system [BR:
soe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110777037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
LRR_6
F-box
Motif
Other DBs
NCBI-GeneID:
110777037
NCBI-ProteinID:
XP_021837323
UniProt:
A0A9R0JK54
LinkDB
All DBs
Position
6:58127242..58135003
Genome browser
AA seq
581 aa
AA seq
DB search
MGSKRCKNPSNLHQKTSSFPDEVLEKVLGMLESHKDRSSVSLVCKDWFNAERWSRTHVFI
GNCYSVTPEIVARRFPKIKSVILKGKPRFSDFNLVPENWGADIHPWLLCFAKAYPFLEEL
RLKRMSVSDESLEFLAMSFPNFKRISLLSCDGFSTDGLAAIATHCKNLVELDIQENGIDD
RSGCWLSCFPENFTSLEILNFSNLHSEISFPSLERLVARCKSLSVLKVNKNVNLEQLQRL
LIRAPWLTQLGTGAFSQELQPAQYASLENMFNNYRNLQTISGLWEANSLYLPVLYPACSE
LSFLNLSDAPLQCEELAQLLDHCPNLRRLWVLDTVGDKGLEAVGSSCPLLEELRVFPASP
YDADIVHGVTESGFVAVSYGCPKLHYVLYFCREMTNAAVATIVQNCPDFTHFRLCIMNPG
QPDHLTNEPMDEAFGSVVKSCKKLRRLALSGLLTDLTFEYIGKYAKNLETLSVAFAGSSD
LGMQCVLAGCPKLRRLEIRDCPFGNSALLSGLEKYENMRSLWMSACNVTMNACRLLAKEM
PRLNVEVINDEDADDCQANKVYVYRSVAGPRKDAPPFVLTL
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaaaaaggtgcaaaaatccctcaaatttgcaccaaaagacctcatctttccca
gatgaagtgctggaaaaagttctgggtatgctagaatctcacaaagatagaagctcagtt
tcattagtttgcaaagattggtttaatgctgaaagatggagcagaacccatgtttttatt
gggaattgctattctgttacacctgagattgttgctagaagattccccaaaattaagagt
gtaatcttgaaagggaaacccagattttcagatttcaatttggtccctgaaaattggggg
gctgatattcatccatggcttctttgctttgcaaaagcttatccttttttggaggaatta
aggttgaagagaatgagtgttagtgatgaaagcttggagtttttagctatgtctttccct
aatttcaagaggatttctcttcttagctgtgatgggttcagtactgatggccttgctgct
attgccactcactgcaagaacttagttgagcttgatattcaggaaaatggaattgatgat
cgcagcggatgctggttgagttgctttcccgaaaacttcacatcattggagattctgaac
ttctccaatcttcattcagaaattagctttccatcccttgagagacttgtagctaggtgc
aaatctttgagtgtcttgaaggtgaacaaaaatgtgaacctggaacagttacagaggttg
cttattcgtgctccttggttgacacagctaggcacgggtgccttctcacaagagctccag
ccagctcagtatgctagtcttgaaaacatgtttaacaactatcgcaatctacaaactatt
tctgggttatgggaagccaattcactctatttgcctgttctttatcctgcttgctcagag
ctgtcatttttgaatttgagcgatgcacctttacaatgtgaagaacttgctcagcttctt
gatcactgtccaaatcttcgccggctttgggtgctagacactgttggtgataaaggtctg
gaagctgttgggtcgagctgccctttgcttgaggaactcagggtatttcctgcaagccca
tatgatgccgacatagtccatggtgttacagagtctggttttgttgcggtgtcctacgga
tgccctaagctccactacgtcctctacttctgccgggaaatgacaaacgccgctgtagcc
accatcgtgcaaaactgccccgattttactcatttccgcctctgcataatgaatccaggt
caacccgaccacttgactaatgaaccaatggatgaggcttttggttcggtggtaaaatct
tgtaagaagcttagaagactcgctctttctggtttattaactgatttaacatttgaatat
attggcaaatatgccaagaatttggagacactttccgtggcttttgctggaagtagtgat
ttgggtatgcaatgtgttctagctggttgtcctaagctgagacggcttgaaataagggat
tgtccctttggtaattcagctcttctttcagggttggagaagtatgaaaatatgaggtct
ctttggatgtcggcttgcaatgtcacaatgaatgcctgcaggctgttagcaaaggaaatg
cctaggttgaatgttgaggttataaacgacgaggatgccgacgactgtcaagctaataaa
gtttatgtttatcggtcagtcgcaggacccagaaaagatgcccctccttttgttctcacg
ctttga
DBGET
integrated database retrieval system
