Spinacia oleracea (spinach): 110777128
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Entry
110777128 CDS
T05137
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
soe03041
]
110777128
Spliceosome [BR:
soe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110777128
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
110777128
NCBI-ProteinID:
XP_021837434
UniProt:
A0A9R0JK96
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All DBs
Position
3:121566099..121574893
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AA seq
445 aa
AA seq
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MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY
YANVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDVLN
QVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSNLT
ELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNAAM
TAFPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHALV
EMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAAKHY
KYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEATE
ALVCKHATSVCGSIIRISFSQSQNT
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaacttccaaggttattcatgtccgcaatgtgggccatgaaatcactgagaat
gatttgcttcaattggttcaaccatttgggtctgtcaccaagcttgtgatgctacgtacc
aagaaccaggcacttttgcaaatgcaggatatggcatcagcaattaatttagtggattac
tacgcaaatgttcagcccaatgtgcggggtcgaaatgtttacatgcaattttcttcccat
caagaactgacaacagatcagactcaaggacgcaaaagtgacacggatggacagccaaat
cgtattcttttggtcagtatacatcaagtcatttatcctatgactgttgatgttctcaat
caagtgttttctccatatgggtttgtggaaaaagttgttacatttcaaaagtcagctggc
tatcaagctctcatccagtttcaaacacgtcagagtgctgcttctgcaatgagtgccctc
catgggcggaatgtgtacgatggttgctgtcagttagatgtacaatactcaaaccttaca
gagctacaagtgaattttaataatgatcgatcgagagatttcacaaacccaaatcttcct
tcagaacagagaggcagaagttcacaatctggttatggtgatgccgggggaatgtatccg
tttcaagctaccgggagtggcgcagttgcatatggccagttgggaaataatgcagcaatg
actgcttttcctggtggcctccctccaggtgttagtggcaccaatgagagatgtactgtc
atagtatctaatttaaatcccgataaaatagatgaagacaagttgttcaacttattttcg
ctgtatggcaacattgtaaggattaagcttctccgaggcaaacctgatcatgccctcgtc
gaaatgtctgatggttttcaagctgaattggctgttaacttcttaaagggagcactactg
tttgggaaacggatagaagtgaactactccaagtattcgaacattacaccatctacagac
acccgagattaccagaattcaaacctgaatcgttttaaccataatgcagcaaaacactac
aaatattgttgctctccaacaaaaatgattcacctatcaagtgtccccgaagatgtaagt
caagaggagattgtagacttgatggaggaacacggcaaggtcgtcagcactaagattttc
gaggcaaatggaaagaaacaagttttagttttattcgagtctgaagaagaggcgactgaa
gcccttgtttgcaagcatgctacttcagtttgtggatcaatcatccgcatctctttctcc
caatcgcaaaacacttga
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