Spinacia oleracea (spinach): 110777427
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Entry
110777427 CDS
T05137
Name
(RefSeq) uncharacterized protein LOC110777427
KO
K24755
WD repeat-containing protein 76
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
soe04121
]
110777427
03036 Chromosome and associated proteins [BR:
soe03036
]
110777427
03400 DNA repair and recombination proteins [BR:
soe03400
]
110777427
Ubiquitin system [BR:
soe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
110777427
Chromosome and associated proteins [BR:
soe03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
110777427
DNA repair and recombination proteins [BR:
soe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
110777427
DSBR (double strand breaks repair)
Other DSBR factors
Others
110777427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WDR55
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_RIG_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
110777427
NCBI-ProteinID:
XP_021837722
UniProt:
A0A9R0HVI9
LinkDB
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Position
4:complement(27717739..27723163)
Genome browser
AA seq
489 aa
AA seq
DB search
MASEKMTEYERKRLENIKRNNDVMASLKIQSHAADLSASSKRLREKSYYKATSKKRKTPE
PESPIVIRRSPRTRGMPPDLSGLPESFKDSSVKPTKSSWLPQSSLEPSETLSMEQAYEGE
GSHLRLIEKLGRLTRNTKSEDENGYLNLSTEFERVHLEEPVDPRSLKLEYDNVARVVPGR
IVSIRFLPTAEMTMVVVGNKNGYLGFWDVKPQNEEEDVIHLYQPHSAPISGISVHPFSLS
KVYSCCYDGFLRMIDIEREKFELVYSSTDRSFLLSVAQQPNDVNSVYFGEGPGGLNMFDK
RAGEISFSLYPHVGRINSIDFSQTDTNILATSSTDGFACLWDLRKMDVKIKADHPEGKAL
WNVKHKRAVHSAYFSPSGRCVATTSLDDTIGVLGGVNFEDTFMIPHDNLTNRWISTFRAV
WGWDDTHLYVGNMKRRVDVLSVTKKKMVHTLESSHMTAIPCRYDAHPCNVGMLAGATSGG
QVYIWTSSS
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgagaaaatgacggagtacgaacgcaaaagactcgagaatatcaagcgcaac
aacgatgtgatggcttctctcaaaattcaatctcacgctgccgatctttccgcctcctcc
aagcgcctcagagagaagtcatactacaaggcaacctcaaagaagaggaagacgcctgag
cctgaaagtcctatcgttattcgtcgttccccgcgcactcgagggatgcctcctgatttg
tccggcctgcctgaaagctttaaagattcatccgttaagcccactaaatcatcttggttg
ccacaatcaagcctcgagccctctgagactcttagtatggaacaagcctatgaaggggaa
ggttcccacctgagactcatagaaaaactcggtagacttacaagaaacactaaatcagaa
gatgagaatggctatttaaacctttctacagagtttgaaagggtgcatctggaggagcct
gttgatccacgatcgttgaagttagaatatgataatgtagcccgagtggtgcctggaagg
atagtatctattcggttccttcctacagcagagatgactatggttgtcgtagggaataag
aatggctatttagggttttgggatgttaaaccacaaaatgaggaggaagatgtgattcat
ctttaccagccacattcagctcctatttctggaatttctgtgcaccctttttccctgtca
aaggtatactcttgctgttatgatgggtttctacggatgattgatattgagagggagaag
tttgaacttgtatactctagcactgatcgctcttttttattgtctgttgcgcaacagcca
aatgatgtgaactctgtttactttggtgagggtccagggggtctaaatatgtttgataaa
agagcgggggagatctcgttctccttgtacccgcatgtgggaaggataaattccattgat
tttagccaaacagacacaaatatcttggcaactagttctacagatggttttgcttgtttg
tgggatcttagaaaaatggatgttaaaataaaagctgatcatcctgaaggcaaagctctg
tggaatgtcaagcataaacgagctgtacactctgcttatttttctccatctggtcgttgc
gtggcaacaacaagtttggatgacaccattggtgtgcttggaggtgtaaattttgaggat
acgttcatgattccccatgataatttgacgaatagatggatctcgactttcagagctgta
tggggttgggatgatacacacctttatgttggaaatatgaaaagaagagtagatgtgcta
tcagtgacaaagaaaaagatggtgcatacactggaaagctctcatatgacggctattcca
tgtcggtatgatgctcacccctgcaacgttgggatgctggctggtgctactagtggcggt
caggtttacatatggacatcatcttcatga
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