Spinacia oleracea (spinach): 110777974
Help
Entry
110777974 CDS
T05137
Name
(RefSeq) RNA polymerase sigma factor sigA
KO
K03086
RNA polymerase primary sigma factor
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soe03021
]
110777974
Transcription machinery [BR:
soe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
110777974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
HTH_24
IL17R_fnIII_D1
HTH_AsnC-type
DUF4423
Motif
Other DBs
NCBI-GeneID:
110777974
NCBI-ProteinID:
XP_021838234
UniProt:
A0A9R0HYJ7
LinkDB
All DBs
Position
1:82989957..82996161
Genome browser
AA seq
492 aa
AA seq
DB search
MMATAAVVGLNAGKRLLSSSFYYSDFTEKLSYSGEQYQIAPTKNVIVAKKTTNFNHRGSS
IKALRECIDGTTIPPIAEPWIPRSSPLEEETLDPETPLEALLLLQKSMLENQLELSFERP
GINDMFRENTCKESHVTSSGTPARVRRINAKKRSQVESKREIPPVVTVSPELLQNRSIGY
VRGMTSDVLLTHAQVVNLSRKIEAGLSLEEHKSRLKEKLGCEPSDEQLANSLKMNRAEVR
SKIIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLVQGGLIGLLRGIEKFDSSKGFK
ISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRSAKTKLEEKGITPTVDKIAESL
NMSHKKVKNATEAVRSVLSFDREPFPSLNGLPGETYHSYIADNRLENNPWHCVDEWALKQ
DVSNLIDTTLREREKDIIRLYYGLDDESLTWEEISKRIGLSRERVRQVGLVALEKLKHAA
RKRRMEALLVKH
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgatggccacagctgctgtcgttgggcttaatgctggcaaaaggcttttgagctcctct
ttctattattctgatttcaccgaaaagctctcttattccggcgaacaatatcagattgct
cccactaaaaacgtaattgtcgccaaaaaaacaactaattttaatcacagaggatcatca
atcaaggcacttagggagtgtatagatggtactacaattcctcctattgctgagccatgg
attccgagatcttctcctttagaagaggaaactttggatcctgaaactccattggaagct
ctccttttgcttcagaagtcgatgcttgaaaatcagttagagttatcctttgaacgccct
ggcattaatgatatgtttagggagaacacttgtaaggaatcacatgtcacatcgtcagga
actccagctcgagtacgaaggataaatgctaagaagagaagtcaggttgaaagcaaacga
gagatacctccagttgttactgtaagtcctgagcttcttcagaatcgttcgatagggtat
gtcagaggtatgacaagtgatgtattgctgactcatgcccaagttgtcaatttatctcga
aagatcgaagctggtctatccttggaggagcataaatcaagactgaaagaaaaactaggg
tgtgaaccttctgacgagcaacttgcgaattccttaaagatgaaccgcgctgaagtaaga
tccaaaataattgagtgttcgctggccagagaaaagttggctatgagcaatgtacgcttg
gtcatgtcaattgctcaaaggtatgagaacatgggtgctgacatggctgaccttgttcag
ggcggactgattggactacttcgtggaattgagaagtttgattcctccaaagggttcaaa
atttcaacatatgtttactggtggatacgtcaaggtgtttctagagcactagttgaaaat
tcaagaactttgaggttacctactcatcttcatgaaagattaagtttaattcgcagcgcg
aaaactaaacttgaagagaaagggataactcctacggttgataaaatagctgaatctctg
aacatgtctcataaaaaagttaagaatgcaacagaggctgtcagatctgtcttatcattt
gacagggaacccttcccctctttgaatggtcttccaggagagacatatcatagttatatc
gcggacaatcgtcttgagaataatccgtggcattgtgtagatgaatgggcactcaagcaa
gatgtaagcaatcttatagataccacactcagggaacgagagaaagatataatacgcctt
tattatggtctggatgatgaatctctgacttgggaagaaattagcaaaaggattggtttg
tcaagagaaagagtccggcaggttgggctagtggcgttagagaaactaaaacatgctgcg
agaaagagaaggatggaagccttgctggtgaaacactag
DBGET
integrated database retrieval system
