Spinacia oleracea (spinach): 110778086
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Entry
110778086 CDS
T05137
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110778086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soe03021
]
110778086
03036 Chromosome and associated proteins [BR:
soe03036
]
110778086
Transcription machinery [BR:
soe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110778086
Coactivators
SAGA/TFTC/STAGA complex
110778086
Chromosome and associated proteins [BR:
soe03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
110778086
STAGA complex
110778086
TFTC complex
110778086
SAGA complex
110778086
SLIK complex
110778086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
LisH_PAC1
Beta-prop_DCAF12
PALB2_WD40
LisH
Beta-prop_VPS8
WD40_like
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
110778086
NCBI-ProteinID:
XP_021838336
UniProt:
A0A9R0HWI0
LinkDB
All DBs
Position
2:complement(91335184..91353233)
Genome browser
AA seq
677 aa
AA seq
DB search
MEEEEIEKAVLAYLKKKGFRQTEVAFQEEQQLQQQQKHPQQQQSKNSSSNSHTDPDVAKL
ILTFTSESESLPAQYYDGYSKLRSWAHNSLDLYKHELLRVLYPVFIHCFMDLVARGHLQE
ARSFFITFREDHETMHERDLQKLEGVLSPSHLKEMEFAHTLRQSKVNIKICQYSHELLLQ
YLLKIQSMLGVVNEHINFQVCPGQPGIISDDADAVTLVDGGQDAANLINQKEIQWGMLED
SIEDRLEKGGGLLLDSDKVDGENKEGENEENKKRSADGGKQAAPVKKSKKDKVGGAGGKA
ARPEVITPLAPRVKPELTLPAMPTEVEHSILEDLRNRVQLSSVALPSVSFYTFINTHNGL
NCASISHDGSLVAGGFSDSSLKVWDMSKLGQQMDNTALQGENDTAGNEHMHSANGGKIPY
TLFQGHSGPVYSASFSPLGDFILSSSADSTVRLWSTKLNANLVCYKGHNYPVWDVQFSPY
GHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHVNCNYIATGSSDKTVRLWDI
QSGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGAIMMWDLASGRCITPLVGHTSCVWS
LAFSGEGSLLASGSADCTVKLWDVNASTKTPRSEEKTGSSNRLRSLRTLPTKSSPVYSLM
FSRRNLLFAAGVLSKRS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaagagatagagaaagccgtgcttgcgtatttgaagaagaaaggtttcagg
caaactgaagtcgcctttcaggaagaacagcaacttcagcaacaacaaaaacacccgcaa
caacaacaatcgaaaaattcgtcgtcgaattctcacactgacccagatgtcgccaagctc
atcctcacctttacctccgagtccgagagccttcctgcacaatattatgatgggtacagc
aagttaagatcatgggcccacaattccctagatttatacaagcatgaattgcttcgggta
ctttatccagtatttattcattgcttcatggatcttgttgcaagaggccatctacaagaa
gcccgtagttttttcattaccttccgtgaagatcatgaaactatgcatgaaagagatctg
cagaagctcgaaggagttctttcaccctctcatttgaaggagatggagtttgctcacact
ttaaggcagagcaaagtaaacatcaagatctgccagtactctcatgagcttctcctccag
tatctacttaaaattcagtcaatgcttggagttgtaaatgagcatatcaacttccaagtt
tgccccggccagcctggaatcatatctgatgatgctgacgctgtgacactggttgatggt
ggccaagatgcggcgaacttgataaatcagaaagaaattcagtgggggatgctggaagat
tcaatagaggatcgcttggagaagggtggaggtttgcttttagattctgataaggtagat
ggggaaaacaaggaaggagagaatgaagaaaataagaaaagatctgctgacggaggaaag
caagctgcaccagtgaaaaaatccaaaaaggataaagttggaggcgctggtggaaaagct
gcacgtccagaagtgatcactccattggcaccaagagtcaaaccagagcttactttgcct
gcaatgccaactgaagttgagcattctatcctggaagacctccgtaatcgtgtgcagttg
agtagtgtggccctgccatcagtaagcttctacacatttatcaatacacacaatggttta
aactgtgcatcaatttcacatgatggatccttggttgctggtggattttcagattcttcc
ttaaaggtttgggacatgtcaaagcttgggcaacaaatggataatactgctttacagggt
gaaaatgatacagctggaaatgaacatatgcatagtgcaaatggtggaaaaataccctat
actttgtttcagggtcattctgggcctgtttattcagcctcgttcagtcctcttggcgac
tttatcctctcttcgtcagcagattcaactgtgcggctttggagcacaaaactgaatgcc
aatctggtgtgctacaagggtcataattatcctgtatgggatgtgcagttcagcccctat
ggacactattttgctagttgttctcatgatagaacagcaaggatctggtccatggacaga
atacagcctctgagaatcatggctgggcatttgtcagatgttgattgtgtccggtggcat
gtaaactgtaactacatagctactggatctagtgataaaacagttcgattatgggatatt
cagagtggggagtgtgttaggattttcattggtcacaggagtatggtattgtctttggca
atgtcgcctgatggtcggtatatggcatctggtgatgaagacggtgcaatcatgatgtgg
gatcttgctagcggtcgttgcattaccccgttggtaggtcacacgtcatgcgtatggtca
cttgctttcagtggtgaaggctcacttcttgcctccggatcagctgattgcacagtaaaa
ctgtgggatgtcaatgcaagcacaaagacgccaagatctgaggaaaagactgggagctca
aacagactccggtcgttaaggactcttcctaccaaatcgtcgccagtttactctttgatg
ttttcgagaaggaatctgctatttgctgccggggttctttctaaacgctcatga
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