Spinacia oleracea (spinach): 110778168
Help
Entry
110778168 CDS
T05137
Name
(RefSeq) probable pectate lyase 8 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe00040
Pentose and glucuronate interconversions
soe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110778168
Enzymes [BR:
soe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110778168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
110778168
NCBI-ProteinID:
XP_021838428
UniProt:
A0A9R0HX32
LinkDB
All DBs
Position
1:48877408..48883665
Genome browser
AA seq
445 aa
AA seq
DB search
MAVSSNTCLASLSSLMLLLLFVTLAVASRTAPSYRSEETGEFQSLKNTTMADKLEEIDTF
NEHAVADPEEVVALVHMSIQNSTQRRNLGYFSCGTGNPIDDCWRCDRNWHKNRKRLADCG
IGFGRNAIGGKNGRFYVVTDPRDDDPVNPRPGTLRHAVIQEEPLWIIFQRDMVIELKQEL
IMNSFKTIDGRGANVHIANRACVTIQYVTNIIIHGIHVHDCKPTGNAMVRSSTTHFGWRT
MADGDGISIFGASHIWIDHNSLSNCADGLIDAVIGSTAITISNNHFAHHNEVMLLGHSDS
YVRDKAMQVTIAFNHFGKGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSADPTINSQGN
RYAAPANPFAKEVTKRVETAENRWKGWNWRSEGDLLLNGAYFTPSGAGASASYARASSLG
AKSSSMVGTITANAGPLSCRRGHQC
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttcttctaatacatgcctcgcttctctctcatctcttatgcttcttctcctt
ttcgtcactctggccgtcgcttctcgcactgctcctagttacaggtcagaagaaacaggg
gagtttcagagcttgaagaacacaacaatggcggataagttggaggagattgatacattt
aatgaacatgctgtggctgacccagaagaggttgttgccttggttcacatgagtatccag
aacagcactcagcggaggaatttgggttatttctcatgtgggacaggaaatcctattgat
gattgctggcgttgtgaccgcaactggcacaaaaaccgtaagcgcctagctgactgcggt
ataggctttggccgaaatgccattggtggcaaaaatggccgattctacgtagtcacagat
cctcgtgatgacgacccggtcaaccccaggcctgggactctgcgccatgcagttatccag
gaagagcctctctggatcattttccagcgtgacatggtgattgagctgaagcaggagctt
atcatgaacagcttcaagacaattgatggtcgtggagccaacgttcatattgctaacaga
gcttgcgtcacaattcagtatgtgacaaacatcatcatccatggcattcatgtccatgat
tgcaaacccacgggtaatgctatggtgaggagttccactactcattttggatggagaaca
atggctgatggtgatggcatctcaatctttggtgccagtcatatttggattgatcacaat
tcactctcaaactgtgctgatggccttattgatgctgtcatcggttcgactgccataaca
atttccaacaatcactttgctcaccataatgaggtgatgctgttagggcatagtgattct
tatgtgagagacaaggcaatgcaagttacaattgcattcaaccattttggaaaaggcctc
atccagagaatgccaaggtgtcgccatggttatttccatgtggtgaacaatgattacacc
cactgggaaatgtatgcaattggtggaagtgcagaccccacaatcaacagccagggaaac
agatatgcagccccagccaacccttttgcgaaagaggtgacaaagagggtggagacagct
gaaaataggtggaagggttggaattggaggtctgagggagatctcctgttgaatggtgca
tacttcaccccatctggggctggagcctcagctagctatgcaagagcctcaagcttggga
gctaaatcatcttccatggtcggaaccatcacagctaatgcaggccctctctcctgccgc
aggggccaccaatgctag
DBGET
integrated database retrieval system
