Spinacia oleracea (spinach): 110778202
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Entry
110778202 CDS
T05137
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
soe04131
]
110778202
04121 Ubiquitin system [BR:
soe04121
]
110778202
Enzymes [BR:
soe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110778202
Membrane trafficking [BR:
soe04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
110778202
Ubiquitin system [BR:
soe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110778202
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-Nse
zf-RING_16
Prok-RING_1
U-box_ZFPL1
VPS18_RING_C
DUF7560
FAR1_N
Motif
Other DBs
NCBI-GeneID:
110778202
NCBI-ProteinID:
XP_021838461
UniProt:
A0A9R0HX55
LinkDB
All DBs
Position
2:5029781..5034876
Genome browser
AA seq
357 aa
AA seq
DB search
MSLSPPRTRSNPTRIYDSYWCYQCRRIVRLSSDNPSEIVCPRCFGQFLSEMEIPRPRLIL
DFTYDDPSPQARLLEALALMLDPPMRVRNHEPDTPWTVSRQRSSNRDVVLEGPTTERPRW
VRVPQVSNRTRDDWDVEPGLRPRPRWIVVRPTGFQPQGGAAVSQVGRPPQMESDPRNYFL
GPGLQQLINDLTENDRQGPPPAPDTAIEAVPLVKLTAEHVAEGGSECPVCKEEFEVGSEV
RELPCKHVYHSDCIVPWLRLHNSCPVCRTELPVSSVRQCEGVGGVIESEGSSIEDGRPRR
CFNWNRLSSIWPFRSRYSRISPHDVRNTRMSTGAFLLTCTLCLMLVIPLVTYSPIPS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaagtcctcctcgaactcgatcaaacccgacccgtatttacgattcttattgg
tgctaccaatgccgacggattgtccgactctcctcggacaacccgtcggaaatcgtatgt
cctcgatgtttcggtcagtttttgagtgagatggaaatcccaagaccaagattgattttg
gattttacgtacgacgacccgtcccctcaagcccgtcttctcgaagccttggccctcatg
cttgacccgcctatgagggtacgtaaccatgaacccgacaccccttggacggtctcacga
caacggtctagtaatagggatgttgtgctcgaagggcctactacagaacgaccgagatgg
gttcgggtcccacaggtttcgaacaggacgagggatgactgggatgttgaacccgggtta
cgtccccgacctaggtggatcgtcgtaaggcccacgggcttccagccacaagggggggcc
gcagtaagccaagtcggtaggcccccccaaatggagtccgatccaaggaactatttcctt
ggaccgggcttacaacaacttatcaacgaccttacagagaacgaccgccagggcccgcca
ccggcaccggacaccgccatcgaagccgtcccactcgtgaagctcacggcggagcacgtg
gccgaggggggctcggagtgtcccgtttgtaaggaggagtttgaagtaggaagtgaagta
agagaactaccatgcaaacatgtgtatcattctgattgcattgtaccttggttaaggttg
cacaactcgtgcccggtttgtcgaaccgagctaccggttagctcggttcgacaatgtgaa
ggtgtaggaggagttatcgaatcggaagggtcgagtattgaagatggtaggcctcgaagg
tgctttaattggaaccggttgagctcaatttggccatttcgttcgaggtattcaaggatt
agtccccatgatgttcgtaatactaggatgtcaacaggagcgtttttgttgacatgcacg
ttatgcctgatgcttgtgatacccttagtcacatattctccaattccatcctaa
DBGET
integrated database retrieval system
