Spinacia oleracea (spinach): 110778473
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Entry
110778473 CDS
T05137
Name
(RefSeq) small RNA degrading nuclease 1-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110778473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
soe03009
]
110778473
Ribosome biogenesis [BR:
soe03009
]
Eukaryotic type
Pre-60S particles
RNases
110778473
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DEDDh_C
Par-4_C
DUF5617
Motif
Other DBs
NCBI-GeneID:
110778473
NCBI-ProteinID:
XP_021838716
UniProt:
A0A9R0HXM1
LinkDB
All DBs
Position
3:complement(146385538..146390436)
Genome browser
AA seq
490 aa
AA seq
DB search
MDRELAIAPKDVLVQIVKLSQKNGMEGDKGGWKDFLKVYDKKFGASMSDPARRTPEVLRT
FLDTFKKEEHLKFFAKVLTCHSNRDLVKQVAKSEDTESPVQKLVRLTLDHPQYPIEYSFP
SYEQDWIVSKLGKKSKVATSDTLLAVDCEMVLCEDGTEALVKICVVDQDLEVKLHEFVNP
NKAVADYRTQITGVSAKDLDGITCSLADIQKKLKKLLSQGAILVGHSLSNDLKALKVDHP
RVIDTSFVFKLGDESTNRRPSLNNLCKFVLGYELRKKDSPHNCVDDACAAMKLVLAKMKP
GSDEAIPVAQDEVPDSETAKLLIHRIPKDHPSEELCQVIPGDFTIEIQARKKVRGDKYSA
IATFKSPREALNTYNNLEGIEEKDSSGRSQKPVSVQFKDGSTAIVCVRKMTPDNPVVKSS
AKRPCPTDAPVDESKRLKTAQISESPDQNLCVDDDHVKEIDRLKDLLSQRDQEISSLHKI
IAALTRKHGL
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtgagctcgccattgcacctaaagatgttctggttcaaattgttaagttgtcg
caaaagaatggaatggagggtgataaaggaggctggaaggattttctgaaagtttatgat
aaaaaatttggtgcgagcatgagcgatccagctagaaggaccccggaagttttacgcact
tttttggatacattcaagaaagaggaacacttaaagttctttgctaaagttttgacatgt
cactcaaatcgtgacctggtgaaacaagtagcaaagtcggaagacactgaatcacctgta
cagaagttggttcgtttgacccttgatcatccacagtatccaattgagtattcatttccg
tcatatgagcaggactggattgtttctaaacttggtaagaagtccaaggtggcaacatca
gatacattgctggctgttgattgtgagatggttctctgtgaggatggaactgaagccttg
gttaaaatatgtgtagtagatcaggatttagaggttaaactccatgagtttgttaatcct
aataaagcagtagcagattataggacacaaataactggtgtttctgctaaagatttggat
ggaatcacttgttcccttgcagatatacagaaaaagttgaagaagctgttatcccaaggt
gctattttagttgggcatagtctcagtaatgacctaaaagcactgaaggtagatcatcca
agagtcattgacacttcttttgtcttcaagcttggagacgaatctacgaatagaagacct
tccttaaataatttgtgtaagtttgtgctgggttatgaacttcgcaagaaggattctcca
cataattgtgttgatgatgcatgtgctgctatgaaactagtgctagcgaagatgaaacct
ggatccgatgaagctattcctgtagctcaagatgaagtgccggacagtgaaacagcaaag
cttcttatacacagaataccaaaagatcatccaagtgaagaactatgtcaggtcatcccc
ggagacttcaccattgaaattcaggctcgtaagaaagttcgaggtgacaagtattctgct
attgctactttcaaaagtccacgggaggcactaaatacgtataataatctggaaggaatc
gaagaaaaggactcttctgggcggtctcagaaacccgtctccgttcagtttaaagatggc
tcgacagcaatagtatgtgttcggaaaatgacacctgataatcctgttgtcaaaagttct
gcgaaacgaccatgtccaacagacgcacctgtagatgaatcaaaaaggttaaaaaccgcg
caaatatctgaatctccagatcagaatctctgtgtcgatgatgatcacgtgaaggagatt
gacagattgaaggatttgcttagccaaagggatcaagaaatttctagcctgcacaagatt
atagccgctctgacaaggaaacacgggctttaa
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