Spinacia oleracea (spinach): 110778477
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Entry
110778477 CDS
T05137
Name
(RefSeq) RNA-binding NOB1-like protein
KO
K11883
RNA-binding protein NOB1
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110778477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
soe03009
]
110778477
03051 Proteasome [BR:
soe03051
]
110778477
Ribosome biogenesis [BR:
soe03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
110778477
Proteasome [BR:
soe03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
110778477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
SurA_N_3
Zn_ribbon_3
DZR
DZR_2
Motif
Other DBs
NCBI-GeneID:
110778477
NCBI-ProteinID:
XP_021838723
UniProt:
A0A9R0HX89
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All DBs
Position
6:complement(140090674..140096041)
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AA seq
619 aa
AA seq
DB search
MDSQPPLSTPEAPPTVEPPVVCWSNIVKQTPSPTPPQPPKTPTKLFETCKSAKGIAVAIV
DANAIIQGGERLPSLADKFVSVSEVINEIRDPTSRHRLSFLPFSVDTLEPSPESLKKVVS
FARATGDLQTLSDVDLKLIALTYTLEAQVHGTSHLRDSPPPIHVLNVRRLPEKDLPGWGS
NVPNLEEWEALDAATGGGPDHNSRILPLKDLTLNIPVEDQISLQDGSVGNGTVDNDGAGL
TTRRHRRYPPKKREVKLDGKMVADGVDASQGQHDDNDDGDWRPAVSRGTHRRFLRRKARR
DMYEASLDDDEQQEVNKNTEEEVIMEAKCNGLTSDDRHVDQEISEDKKDTDGTNSAENIS
SILEQMRLAEDALKDHEEQDVQIGSHLEVASMDADLEDAHSGGEGDNDEVLDDLENGSVD
TSYAEDDGSEQSWMLRSLSDSSVACITGDFAMQNVILQMGLRLLAPGGMQIRELHRWVLK
CHACQNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLQARKQRFSLRGTKFSLPLPQG
GRDAMSKNPILREDQLPQKFLYPKTKKKSNKDDDIFPGDSIFGHHTEKKTYNRPPVRQAL
AVFSGKRNPNDNHYSRAKH
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggattcgcaaccgccattatcaacaccagaagcaccaccgacagtagaaccaccggta
gtatgttggtcgaacatagtgaagcaaaccccctcgccaaccccaccgcaaccaccaaaa
actccgaccaaactcttcgaaacttgcaaatcagccaaaggcatagctgtagccattgtc
gacgccaacgccattatccaaggaggagagagactcccttctttagcggacaaattcgta
tctgtctccgaagtcatcaatgaaatccgtgaccccacttctcgccaccgtctgtctttc
ctccctttctccgttgacaccttggagccctctcctgaatccctcaagaaagtcgtcagc
tttgctagagcaacgggtgatctgcagactctttccgatgttgatcttaagctcattgct
ctaacttacacactggaggcgcaggttcatggtactagtcatcttagagacagccctccc
cctatccatgtcttgaatgtaaggagattgcctgagaaggacttgccaggttggggttcc
aatgttcctaaccttgaggagtgggaggcattggatgctgcgacaggtggtggtccagat
cataattctagaattctcccgttgaaagatttaaccttgaatatccctgtcgaggatcaa
ataagtttgcaagatggttctgttggaaatggtactgtagataatgatggtgctggcctg
actaccaggagacacaggcgatatccacccaaaaagagagaggtaaagcttgatggaaag
atggtggcagatggggtggatgcatctcaaggacagcatgatgataatgatgatggtgat
tggcgtcctgctgtcagccgaggcactcatagaaggtttctcagaaggaaagctcgacgt
gatatgtacgaggcatctttggatgatgatgagcagcaagaagtcaacaaaaatactgaa
gaggaagtcatcatggaagctaaatgtaatggtctgacttctgatgataggcatgttgat
caagagatttctgaggataaaaaggacactgatgggacaaatagtgctgaaaatatttca
tcaattttggaacagatgagacttgcagaagatgctttgaaagatcatgaagaacaagat
gtgcaaattggttctcatttagaggttgcatcaatggatgcggacttagaagatgctcat
tccggaggtgaaggggataacgacgaagtattagatgacttagaaaatggaagtgttgat
acctcatacgcagaggatgatggtagtgaacagagctggatgctaaggtctttatctgat
tcaagtgttgcttgcatcactggagactttgcaatgcaaaatgttatcctgcagatgggt
ttacgtttgctagcccctggaggaatgcagatacgcgagttgcacaggtgggtgctaaaa
tgtcatgcctgccaaaatgttactgctgaaattggtcggattttttgcccaaagtgtgga
aatggtggtaccttaaggaaggtggctgttacagtaggtgaaaatggggttgtgctacaa
gctcgaaagcagcgtttctccttgcgtggaacaaagttttcgctaccattgccccaagga
ggaagagatgccatgagtaagaatcccatattacgggaagaccagctcccacagaaattc
ttataccccaagacaaagaagaagtctaacaaggacgatgatatctttcccggggacagc
atctttggtcatcatactgaaaagaaaacatataacaggccgcctgtaagacaagcatta
gcagtcttcagcggtaaaagaaatcccaatgacaaccattactctcgtgccaagcactaa
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