Spinacia oleracea (spinach): 110779218
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Entry
110779218 CDS
T05137
Name
(RefSeq) uncharacterized protein LOC110779218
KO
K14794
ribosomal RNA-processing protein 12
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
soe03009
]
110779218
Ribosome biogenesis [BR:
soe03009
]
Eukaryotic type
90S particles
Other 90S particles
110779218
Pre-60S particles
Other pre-60S particles
110779218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
110779218
NCBI-ProteinID:
XP_021839447
UniProt:
A0A9R0HYW8
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All DBs
Position
3:complement(33805187..33822028)
Genome browser
AA seq
1143 aa
AA seq
DB search
MKHTPTAGEQSKGQEAQMDPAESTGFDPTVDISSQLMQRYSSSSAPQHRHLMATAAAVKS
ILLEDSLPLSPLCYFAATINALSQPQNDAASASALATFLSIVLSLVPEDYINPEKAAEAA
AILVRVLGSEEGEMVVGSASSARCVVKCLGILLGFCDLEDWDSVELPFQTLLKWSIDKRP
KVRKCALVYLENALKSFQSETVKRKASILVMSLLESYMSIAVKLGIIQKVDESGSERQCE
TEQLDVVHALSVVRVALPYICDKSIKKTILKLIELLDSRSSTFTRPVLNAIEALLEKVEG
GIIVQVAEDIIDALSSFISSETNPNDSIISAANLLKISLDKLHSEDTDKWNKSLSVGVNA
IAGLLTREDEVASKSSNILKNLIVDQLSDDIESQPANGEESKGITSMCSTFMEMLDSLAG
IPNEHTLAVLSVLFLKLGRSSCSHMKNIVLKLAEIFTHADGNKHDTVHLQNSLGCAVVAM
GAENVLRLVPISFDEENSTYANMWMLPILKKYTCGASLGYFTEHIVPIAQSLQKASRKVK
KSVTGQDLQALAHGLWGLLPAFCRHPTDVSKSFQSFAKLMLVQLKKDASMREEIANSLQE
LVKQNKCLPKFDAAIVEPIKHSSGFSVDDYLVEKRNLLSYSKKAAIKNIKALSLYSNELL
LALMTVFLNSKPAKRSSLKKAISCLASISDSSVTKKIFISSLERFPSVKAVSVSEDSDPS
NALLSDVPSDSSTIGENSQWSLMLDLASSIVERADEDLVGLIFKLTKHVLQAGDGKCITE
AYYTLSCVLEEHPWFCSLKMDELVDLIMGLKAPADISSFSNRLSCLHLLLVHSLKSSSDV
ENTKPFLILNDIILALKDSREEARKIAYDVLLKLSSCLVNSSDADSDGPYYKLISMIMGY
LSGPSPHITSAAISALSMFVFKEPELCVKVPHVVSSVASLLQTKAVETIKAVLGFIKVLV
SSLEAKDLQNFLPAIIDGVLPWSSISRHHFRSKVTVILEIVIRKCGFPTIKSATPERYQS
FIRKVSQNRHGNTTSKEADSADAKTQLSNVPINGSKKRSYEETNNNRNGSELQRNKRRNQ
IQDFQSPGGTRRNVAGFDKKPNKFKHNNNSKAGQNQREKRFDRPSSSIQKRNGPTKGRFS
RKS
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatactcccaccgccggtgaacaatcaaaagggcaagaagctcaaatggaccct
gccgaaagcaccggcttcgatccaacggtggatattagctctcagcttatgcaacgctac
tcatcctcctccgctccacagcaccgccacctcatggccacagccgccgccgtaaaatct
attcttctcgaagactccctccctctctctcctctctgctacttcgccgccaccattaac
gccttatctcagccccagaacgatgccgcttctgcctctgctctcgccacttttctctcc
attgttctatcgcttgttccagaagattacattaatccggagaaggcagcggaggcggct
gctattttggttagggttttggggagcgaggagggagaaatggtggtagggtcagcttcc
agtgctaggtgtgtggttaagtgtttagggattttgctagggttttgtgatttggaggat
tgggattctgttgaattgcccttccaaaccttgcttaaatggtccattgacaagcgtcct
aaggttagaaaatgcgccttagtgtatttagagaatgctcttaaatcttttcaatctgag
actgtgaaaagaaaggcaagcatattggttatgtctttgctggaaagctacatgtctatt
gcagtaaaattgggtataatacaaaaggtagacgagtctggaagtgagagacaatgtgaa
actgagcagttggacgttgtccatgcgttgagcgttgtgagggttgctttgccatatatc
tgtgacaaaagtatcaaaaaaacaattttgaaattaatcgagcttcttgattcacgctct
tctacttttacaaggcctgttcttaatgctattgaagcattattagaaaaagtcgaaggt
ggaattatcgtgcaagtggctgaggacataattgatgcactctcatcatttatatcttca
gaaacgaaccccaatgacagcatcatttctgcagcaaacttactgaagatttctctggac
aaacttcattcagaagacactgacaaatggaacaagagtctttctgttggagttaatgct
attgcaggccttcttacacgtgaggatgaagttgcttcaaagtcttcaaatattttgaag
aacttgattgttgaccagttgtctgatgacattgagtcccaaccagctaatggcgaggaa
tcaaaaggaattacatctatgtgctcaaccttcatggaaatgctagattctttagctggg
attcccaatgaacatacactagctgttctatcagttctgttcctcaaacttggccgcagt
tcatgctcacatatgaagaatattgtccttaagttggcagagatctttactcatgccgat
ggtaacaaacacgacacggttcatttgcaaaatagtttgggctgtgctgtagttgctatg
ggagctgaaaatgttctaaggcttgtaccaatttcttttgacgaggaaaattcaacatat
gcaaacatgtggatgttacccattctaaagaagtatacctgtggggcatcccttggatat
ttcacagagcatattgtccccatcgctcaatcactccaaaaggcttcccgtaaagttaaa
aagtcagtaactggacaagatctgcaggctcttgcccatggtttatggggtcttttacct
gcattttgtcgccatccaactgatgttagcaagagttttcaatcctttgctaaattgatg
ctcgttcagctgaagaaagatgcatcaatgcgtgaagaaattgctaattccttgcaggaa
cttgtaaaacaaaacaaatgcttgcctaaatttgatgctgctattgttgaacccataaag
cactcatctggcttttcagtggacgattatctagtggagaagagaaacttactctcttat
tccaagaaagctgctataaaaaacatcaaggcgttatccttgtattctaatgaactgctt
ctggccctgatgactgtttttcttaattcaaaacctgcaaagcgttcatctctaaagaaa
gctatcagttgcttggcctcaatctctgactcatctgtcaccaagaagattttcatttct
tctcttgagaggtttccgtcggtgaaggcagtttctgtatctgaagattctgatccgtca
aatgcattacttagtgatgtgccatcggattcaagtaccattggtgaaaattcacagtgg
tctttgatgctggatttagcctcatccatcgtggagagagctgatgaggatcttgtcggt
ttgatctttaaattgacaaaacatgtactgcaggctggtgatggaaaatgtattactgaa
gcttattatactttgagctgtgttctagaggaacacccttggttttgttctttgaaaatg
gatgagctagtcgaccttattatgggcttgaaggctcctgctgatatctcttctttcagc
aatcgcctaagttgtcttcacttattattggtccattctctaaagagcagttctgatgtg
gagaacacaaagccttttcttattttgaatgatattatacttgcgctaaaagattccagg
gaagaggccaggaaaatagcttatgatgtcttgctcaaactaagttcctgcttagtaaat
tcatctgacgcagattctgatggaccatactacaaactgattagtatgattatggggtat
ctctctggcccatcacctcatataacaagtgcagccatctctgcattgtctatgtttgta
ttcaaggagccggagctctgtgtaaaagttccacatgtagtttcctctgttgcgtctttg
ctacaaactaaagccgtggaaactatcaaggctgttttgggcttcatcaaagtattggtt
tcatctctagaagcaaaggacttgcagaattttttaccagctatcatagatggagttctt
ccatggtcatctatctcaagacatcatttcagatcaaaagttactgtcatactggagatc
gtgataagaaagtgtggttttcctacaataaagtctgcgactcctgaaagataccagtca
ttcatcaggaaagtttcacagaatcgtcatgggaacacaacctccaaggaagctgactca
gctgatgcgaagacacaactttcaaatgttccgataaatgggtcaaagaaaaggtcatac
gaggagacaaataacaatagaaacggttcagaattgcagaggaacaagaggaggaatcaa
atacaagatttccagtctcctggtggcactaggagaaatgttgcgggatttgataaaaaa
cccaataaatttaagcataataataactctaaagcaggtcaaaatcaaagagagaagaga
tttgacagaccctccagcagtattcaaaagagaaatggaccaacgaaggggagatttagc
cgaaagtcgtaa
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