Spinacia oleracea (spinach): 110779543
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Entry
110779543 CDS
T05137
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
110779543
Enzymes [BR:
soe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
110779543
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
EAD10
RhgB_N
Motif
Other DBs
NCBI-GeneID:
110779543
NCBI-ProteinID:
XP_056697230
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Position
3:complement(3634342..3644030)
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AA seq
636 aa
AA seq
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MDKVTKWKVVLDNGIVQVAFSIPEGYVTRIRYGGLDNILDANNKISQRGYWDTVATSNNL
DNDEQNKIGIVGSSFKIINKTEDQVEISFLCPQMKSPSLKVDIRYVLLRGSSGFYSYAIF
EREQGSPTLNVAQIRTVFKLQPKNFRYMAISDTIQRLMPLEQDRETGQTLAYKEAVLLTK
PTNIKLKGQVDDKYQYACDDKDNKLHGWISTDDRIGIWMITASDEFRMGGPLKQDLTSHV
GPTMLAMFHSTHYGGLNLIMKFKEGEAWKKVFGPYFVHLNSLPAGKGGHQMLWKNAKDQM
LKEVKSWPYDFPLSKDYPKANERGSVEGRLLVSDGYLSKKQIPANYGWVGLSAPGDAGSW
QTEMKGYQFWTQTDHEGKFLIKGVHVGTYNFYAWVPGYIGDFKSASIVNIQSGKQISLGD
QVYTPPRNGDTLWEIGIPDRTSAEFFIPDPRPNLTNPVLFLDGSNKYKQYGLWDRYTDLY
PKEDLIYTVGVSDFRKHWFFAHVLRRIGDKYESTTWQIVFPLKEVVPNSNYTLQIALASA
TESELQVRVNNPNIKSRPIFTTLLIGRDNAIARHGIHGLYILYSIGLKSELLKSGKNTIF
LTQSRNNYEFRGIMYDYLRLEGPSFKSSLRKTLQEL
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggacaaggtcacaaaatggaaggttgtgttggacaatggtatagttcaagtcgccttc
tctattccagaaggctacgtaacaagaatacggtatggtggcctagacaatatacttgat
gcaaacaacaagatatctcaaagagggtactgggatacagtagcaaccagtaataaccta
gacaacgatgaacaaaataaaatagggattgtaggatcaagttttaaaatcataaacaaa
acagaagatcaagtggaaatttcatttttatgtccccagatgaaatcaccatcactgaaa
gtagatatcaggtatgtattacttcgaggcagctctggtttctactcgtatgccatattt
gaacgtgaacaaggatcacctacgttgaatgtggctcagataaggactgtttttaagctt
caacctaaaaattttcgttatatggcaatttcggataccatacaaaggttaatgcctttg
gaacaagaccgtgagactggtcagactttggcctataaagaagccgttctcttgacaaag
ccaaccaatataaagttgaaaggacaggttgatgataagtatcaatatgcttgtgatgac
aaagataacaagttacatgggtggatatccactgatgatcgaattggaatatggatgata
acagcaagtgatgaattccgaatgggtggaccacttaaacaagaccttacatctcatgtt
ggtccgactatgcttgctatgtttcatagtactcattatggtggtctaaatttaataatg
aagttcaaggaaggggaggcatggaaaaaggtatttggaccatactttgtgcacttaaat
tcccttcctgcaggaaaaggaggtcatcaaatgctatggaaaaatgcaaaagatcagatg
ctcaaggaagttaaaagttggccttatgattttcctttatcgaaagattaccctaaggct
aatgaacgtggatcagtcgagggaagattgctcgttagtgatgggtatttatctaaaaaa
caaataccagcaaattatgggtgggttggtttgtctgcacctggtgacgcaggatcatgg
caaacagaaatgaaaggttatcagttctggactcaaactgatcatgaaggaaagtttctg
atcaaaggtgttcatgttggcacttacaacttttatgcatgggttccaggatatatcggg
gattttaaatctgcatcaatagtcaacattcaatcagggaaacaaattagtttgggggat
caagtctatacacctccacgaaatggagatacactttgggaaattggaatccctgatcgt
acttcagccgaattctttatacctgatcctagaccaaacctcaccaacccagtgcttttc
ctggatgggtcaaacaagtacaaacaatatggtctatgggatcgatacactgatctttac
ccgaaggaagatcttatttacactgttggtgttagtgattttcgaaagcattggttcttt
gctcatgtacttaggaggataggagataagtatgagtcaaccacatggcagattgtattc
cccttaaaggaggttgttcccaacagtaactatacactacaaatcgcacttgcatctgca
accgaatctgaattacaggttagagtcaacaaccctaacatcaaatctcgtcctattttt
acgacattgctgataggcagagataacgcaattgcaaggcatggaatacacggactatat
attttatatagcataggtctaaaaagtgagttacttaagagtggaaaaaacacaattttt
ctcactcaatctaggaacaattatgaatttcgaggaattatgtatgactacttacgttta
gaaggaccttcatttaagtcgtctcttaggaaaacgttgcaagaactttaa
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