Spinacia oleracea (spinach): 110780108
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Entry
110780108 CDS
T05137
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2
KO
K14948
polypyrimidine tract-binding protein 2
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
soe03041
]
110780108
Spliceosome [BR:
soe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110780108
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
DUF4523
Motif
Other DBs
NCBI-GeneID:
110780108
NCBI-ProteinID:
XP_021840231
UniProt:
A0A9R0I0D6
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All DBs
Position
3:4801507..4811044
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AA seq
438 aa
AA seq
DB search
MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANKNQAFI
EFADLNQAIAMISYYASSSEPAQIRGKTVYLQYSNRQEIVNNKTTADTAGNVLLVTIEGD
EARQVSIEVLHLVFSAFGFVHKITTFEKTAGFQALIQFSDTETASSAKNALDSRSIPRYL
LPEHVGPCSLRITYSAHTDLSVKFQSHRSRDYTNQYLPVAPSAIDATGQLSVGVDGKKME
PESNVLLASIENMQYAVTLDVLNTVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK
EALEGHCIYDGGFCKLHLSYSRHVDLSIKVNNDRSRDYTVPIHGGMIQSSILGQQPPGGG
PMQGGNAPPPYNGGQYPGPPPPSGGWAPPQHMHMQMPMQNYQYNMQPGHGATPPGPPGTM
PPGPMHMQNPPGMPPYSQ
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgtgtcgagtcagccacagttccgttacacccaacctccatcgaaggtgctt
catttgagaaacttgccatgggaatgcactgaggaggagctgattgaattggggaagcct
tttggtaaggttgtcaatacaaagtgcaatgttggggccaacaaaaatcaagcattcatc
gaatttgcggatctaaatcaagccattgccatgatatcctactatgcttcgtcatcagaa
cctgctcaaatacgggggaaaactgtgtacttgcagtattccaacagacaagaaattgtg
aacaataagactactgctgacactgcaggaaatgtgttgttagttactattgagggagac
gaagctcgccaagtcagcattgaagtattacacttggtattttcggcatttggatttgtg
cataagattacaacttttgaaaagactgctggatttcaggcgttgattcagttctctgac
acagaaactgcatcttctgcaaagaatgctcttgattcaagaagtatcccgaggtaccta
cttcccgagcatgtgggcccctgttctctcaggataacttattccgcacatactgatttg
agcgtcaaattccagtctcaccgcagcagggactacactaatcaataccttccggttgcc
ccgtctgctatagatgcaactggtcagctaagtgtgggtgtggatgggaaaaaaatggaa
ccagagagtaatgtgctactggcatcaattgaaaatatgcagtatgctgtcacattagat
gtcctaaacacggtcttttctgcctttggacctgtgcaaaagattgctatgtttgacaaa
aatggagggttgcaggcgttgattcagtacccagatgttcagaccgctgttgttgcaaaa
gaagcacttgaaggacattgcatatacgatggaggtttttgcaaactccacctatcatat
tcacgccacgttgatctaagcatcaaggtaaacaacgacagaagcagagactacacagtt
cctatacacgggggaatgatccagtcctcaattctcggacaacagccaccaggaggaggc
cctatgcagggaggtaatgctccccctccctataacggcggacaataccccggaccgcct
cctccatcaggaggctgggccccaccccaacatatgcacatgcagatgccaatgcaaaat
taccaatacaacatgcaacctggacacggtgctacacctcccgggcctccgggtaccatg
ccaccaggcccgatgcatatgcagaacccacctggtatgcctccatacagccaatga
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