Spinacia oleracea (spinach): 110780242
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Entry
110780242 CDS
T05137
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
110780242
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
soe04040
]
110780242
Ion channels [BR:
soe04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
110780242
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ_SCN5A_C
Ion_trans_2
IQ
Motif
Other DBs
NCBI-GeneID:
110780242
NCBI-ProteinID:
XP_021840362
UniProt:
A0A9R0JMP9
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Position
3:4938289..4947413
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AA seq
708 aa
AA seq
DB search
MKYNQEKVVRFQDWVPQKSADGQYYIHDDTRFGSIRRSMGSVSNSFKRGWEYFPLSFKRI
GKSLSASSLSESWPKKKVLDPQGAFLQKWNKIFVLSCFIAVSVDPLFFYIPVINDDKKCL
DLDHKLEITASVLRSFTDIFYLLHIIFQFRTGFIAPSSRVFGRGVLVEDAKAIAKRYLSS
YFWIDILAVLPLPQVAILIIIPRLSGFRSANTKNLLKFIVVFQYVPRILRVFPLYKEVTR
TSGILTETAWASAAFNLLLYMLASHVAGAFWYLFSIERETTCWKSACRKRPQCDSGALYC
GVSSGNNTYLNDHCSIDPDNPGPFDFGMFLNALTSGVVATTDFPKKFLFCFWWGLQNLSS
LGQNLQTSTYIWENLFAILIAIAGLVLFAFLIGNMQTYLQSITTRLEEMRVKKRDAEQWM
SHRLLPQDLRDRIRRYEQYKWQETRGVDEESLIQNLPKDLRRDIKRHLCLDLVTRVPMFE
KMDDQLLDAMCDFLKPVLYTEDSYVIREGDPVDAMVFVMRGKLLTITTNGGRTGFLNSEY
LKAGDFCGEELLTWALDPSPSSNLPLSTRTVQTLTEVEAFALMADDLKFVASQFRRLHSK
QLRHTFRFYSQQWRTWAACFIQAAWRRYHRKKMEQSLKEEEDRLQDALAREAGTSSPSLG
ATIYASRFAANALRALRRNGARKARLPERISPMLLQKPAEPDFSVEDQ
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaagtataaccaggaaaaagttgtcaggtttcaggattgggttcctcagaaaagtgct
gatggacagtattacatacatgacgatactcgatttggcagtattagaagatcaatgggc
tcggtatcaaatagcttcaaaagaggatgggaatattttcctttaagttttaaaagaatt
ggcaaatctctcagtgccagttctttaagcgagtcatggcctaagaagaaagtgctagat
ccacaaggcgcttttcttcagaaatggaataagatatttgtattatcctgttttattgca
gtctcggtagatcctttatttttctacatccccgtgattaatgatgataaaaaatgcctg
gatttggaccacaagttggagatcactgccagcgttttacgctcctttactgatatcttt
tacttgcttcatatcattttccaattccgtaccggttttattgctccttcttctcgggta
tttggcagaggggttttagtagaagatgcaaaagcaattgcaaagagatatctctcctcc
tacttttggattgacattctcgctgtgcttcccttaccacaggtggcaatcttaattatc
atacccagattgagcggcttcagatcagcaaacacgaaaaacttgttaaagtttattgta
gtcttccagtatgttccaaggatccttcgagttttcccattatacaaggaagttactaga
acatcaggcatcttgactgaaacagcatgggctagtgctgcctttaatctcttgctttac
atgcttgcaagtcatgtagctggagctttttggtacttattttctattgaacgggaaact
acttgctggaaaagtgcttgtagaaagcgtcctcagtgtgattctggtgctctatattgt
ggcgtgagttcaggaaataacacttatttgaatgatcactgctctatcgaccctgataat
ccagggccctttgattttggaatgtttcttaacgcccttacatccggtgtagtggcgaca
acagatttcccaaagaaattccttttctgtttctggtggggcttacaaaatttgagctca
cttggtcaaaaccttcaaacgagtacctatatctgggaaaacttgtttgccattttgatt
gccattgctggtctcgtgctgtttgcatttcttattggaaatatgcagacgtatctgcaa
tctataacaacacgactggaggaaatgagagtgaaaaaacgagatgcagagcagtggatg
tcacaccgtcttctccctcaggatttaagggataggatcaggcgttatgaacagtacaag
tggcaagaaacaagaggcgtggatgaagagagtttaatccagaaccttccgaaggatttg
aggagagacataaagcgtcacctttgtttggatcttgttacaagggttccaatgtttgag
aaaatggatgatcagcttctagacgcaatgtgcgactttctgaagccagttctctacacg
gaagatagctacgtcatccgagaaggagaccctgtagacgcgatggtcttcgtgatgcgt
ggcaaactgctaaccataaccacaaacggcggccgaacagggtttctcaattccgaatac
ttaaaagccggcgatttctgtggcgaggaactcctaacgtgggccctagacccgagcccg
tcatctaacttacctctctcaacccgaacggtccaaacccttacagaagttgaagccttt
gctttaatggcggacgacttgaaattcgtggcctcacaattcagaagacttcacagcaag
caactccggcatactttccggttttactcccaacaatggcggacatgggcggcttgcttt
atacaggcggcatggaggcgataccataggaagaagatggagcagtctctcaaggaagaa
gaggatcgtttacaagacgcattggcacgggaagccgggacctcgtcaccgagtttgggt
gctacgatttacgcgtcgaggtttgctgcgaatgcacttcgggctttacggagaaacggg
gcccgaaaggcgaggttgccggagagaatatcgcctatgttacttcagaaaccggcagag
ccggatttttcagtcgaagatcagtag
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