Spinacia oleracea (spinach): 110781211
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Entry
110781211 CDS
T05137
Name
(RefSeq) SNF2 domain-containing protein CLASSY 4-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110781211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soe03400
]
110781211
DNA repair and recombination proteins [BR:
soe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
110781211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
110781211
NCBI-ProteinID:
XP_056686840
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All DBs
Position
6:complement(147427040..147433670)
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AA seq
1218 aa
AA seq
DB search
MEPIGRRTRLQRALRSEKTKKDNKQARIAARRRFNAAKTAVIENGFRYVSATDDDGEDSD
DDEEAAVVVDEEEFMRGYVAPNNNDVNANYNPFLIANIVAEEKGKGVINDYYETGFESDE
SLQIIGERWNPLDVCDNASDDDNEVVDVADVVDFDVAVDDVVDFDVDIDDVVDFDVAVDG
VNGGGGGGGDGGGCPLLRGGNEEDKPGTSGVKDFEMADLEFSEGSDCGFQVGIPELSESS
EILSSDDDDDDDDDDEEEKDEGRCVSSYDEILKMVPEVKKRRRSPEKIDPTHLKTQKVVA
PPPRKRLLVFDEEEDEEDLLGQVPKEEVVTEEEVVALGKKPQVVSDNAPPKKAEVVALGK
KPQVVSDNAPPKRAEEGVVVFALPCRKQSRKKPTKRHNVLDTFESIFEREENVAFDTTRK
EAAAKVVGTFPANLVFDTTRKEAAAVAAVVGTFPAKVVFNDHNKKKVKVKDVEDGLLNTI
LENGNAAVLDDIHTKEVEDLLRKFRFGVEEKPVPEKTIDEEDIEGLFKELDFGLDVCDIG
LQTPCLYDNEEEDTILCDNAVSQAKLCRQGKHFLVENEEIGLICKFCKIVAVEIRDVTPA
FNDNPFGKSVSSSNGRFPHDHKSNTSEGFQFLDSDNDTRSAHEEEDTRGTVWDLIPGTKR
TLYEHQQKGFEFIWTNVAGSIKIDDLGKPSEFGLGGCIICHAPGTGKTRLALVFLQSYLK
KYPMSKPVIIAPSSMLLTWEEQFARWNVDVPFVNLNSDELSSKETEVLKCVKSFKHSKSI
RKAKLCIWAMGKGVLGLSYRMFEKLAGERKNTDVVIKKALLEQSGILVLDEGHTPRNEDS
YIWKVFSDVRTKKRIILSGTPFQNNFVELNNTLSLIREEFGDPLLKGNQVQSVRKGKRRF
YSDSSSRVVDEEKRIQELRNRLKPFVHVHKGEILRKTLRGLFHSVIVLKPSDLQKQYIQK
LGVIRSTLLADYLVSITSVHPCLLYKCEQVPKFVNKELLQIYKTDLDVGVKIKFLFELIK
LSKGEKVLVFSQFLIPLTFIGELLKSHFNWSEGNEYLLMEGKQRTKLRQSLIGQFNDPLS
SARVLLASTKACCEGIHLVGASRVVLLDVVWNPSVERQAISRAYRLGQKKDVYVYHLITA
GTLEREKYDRQVAKERVSEQVFISSEGEGLKTNTLSGISEDRILEEMIEHEKLKNMFEKI
IYQPKAHKLIESFGPLTL
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggagccaattgggagaagaacaagactacaacgagcactgaggagtgagaaaacgaaa
aaggataacaaacaagctcgtattgcggctcgacggagatttaacgcggcgaaaacggcg
gtaatagaaaacggtttccgttatgtttctgcaactgatgatgatggtgaggacagtgat
gatgacgaggaagcagctgttgttgttgatgaggaagaattcatgagagggtatgtcgca
cccaacaacaatgatgttaatgcgaattataatcctttcttaattgctaatatagttgct
gaagaaaagggtaagggagtaatcaatgattattatgaaactgggttcgaaagtgatgaa
tcattgcagattattggagagagatggaatcctcttgatgtttgcgataatgcttctgat
gatgacaatgaagttgttgatgttgctgatgttgttgattttgatgttgctgttgatgat
gttgttgattttgatgttgatattgatgatgttgttgattttgatgttgctgttgacggt
gttaatggtggtggcggtggtggtggtgacggcggtggttgtccgcttttaaggggtgga
aatgaagaggataaacccgggacttccggggttaaggactttgagatggctgatttggag
tttagtgaggggagtgactgtggttttcaggtggggattccggaactttctgagagttcg
gagattttaagctcagatgatgacgatgatgatgatgatgatgatgaggaggagaaggat
gaaggaagatgtgttagttcatatgatgagattttgaagatggttcctgaggttaagaaa
cgaaggaggtcgccggaaaagattgaccctactcatctgaagacacagaaggtggttgcg
ccgccgcctcggaaacggctgctagtgtttgatgaggaggaggatgaggaggatttgtta
ggccaagtacctaaagaggaggtggtgacggaggaggaggtggtggcgttgggaaagaaa
cctcaggtagtttcagacaatgcgcctcctaaaaaggcggaggtggtggcgttgggaaag
aaacctcaggtagtttcagacaatgcgccaccgaaaagggcggaggagggggtggtggta
tttgcacttccttgtaggaaacagtctcggaaaaagccgacgaagaggcataacgtgttg
gacacttttgagtctatttttgagagggaggagaatgtagcgtttgacactactcggaag
gaggcggcggcgaaagtggtaggtacttttccggcgaacttagtgtttgacactactcgg
aaggaagcggcggcggtggcggcagtggtaggtacttttccggcgaaggtagtgttcaat
gatcacaacaagaagaaggtaaaggttaaggatgttgaagatgggttgttgaacacgatt
ttggagaatgggaatgcagctgttttggatgatattcacacgaaagaagttgaggatctt
cttcgaaagtttaggttcggtgttgaggagaaaccggtgccggaaaagacaatcgatgaa
gaagacattgaaggcttgtttaaggagttggattttgggcttgatgtttgtgatattggt
ttgcaaactccttgtttatatgacaatgaagaggaagataccatactctgcgacaatgca
gtttctcaagcaaaactttgccggcaagggaagcactttctagtagaaaatgaagaaatt
gggttgatatgcaagttttgcaagattgtggcagttgaaattagagacgtaacaccagct
tttaatgacaatccatttgggaaatcagtgagctcaagcaatggaaggttcccacatgac
cataaaagcaacacctctgaaggatttcagtttcttgattcagacaatgataccagatct
gctcatgaagaagaggacacccgtggtacagtttgggacctaattcccggtacaaaaagg
acattatatgaacaccaacagaaagggtttgagttcatctggacaaatgttgctggtagt
ataaaaattgatgatcttggaaaaccatcagagtttggtctaggggggtgcataatctgt
catgcaccgggaactggaaaaacacgtttagcccttgttttccttcaatcatacctaaag
aaataccccatgtcaaaacctgttattattgctccgagtagcatgcttctaacttgggaa
gaacagtttgcaagatggaatgttgatgtcccctttgtgaacctaaacagtgatgaactt
tcaagtaaggaaactgaggtacttaaatgtgtgaaaagtttcaaacatagcaagtctatt
aggaaggcaaagctttgtatttgggctatgggaaagggtgtattaggacttagttacaga
atgtttgagaaacttgctggtgaaaggaagaacactgatgttgtaatcaagaaagccctt
cttgaacaatctggtatacttgttcttgatgaaggacacacacctagaaatgaggatagc
tatatttggaaggttttctctgatgttagaaccaagaaaaggatcatactttctggtaca
ccttttcagaacaactttgtggagctgaataacacactttctcttattagggaagagttt
ggggatcctttactgaaagggaatcaagttcagagtgtaagaaaaggtaaaaggaggttt
tacagtgatagtagtagcagagtagtggatgaagagaaaaggattcaggaattgagaaac
cgtctgaaaccctttgttcatgttcataaaggggagattttgaggaagactcttcgcggg
ttgtttcattcagtgattgtgttaaaaccatctgatttgcagaagcagtatatccagaaa
ttgggggtgattaggtcaaccttattagcagattacttggtgtcaattacatcagtacac
ccttgtcttttgtacaagtgtgagcaagtaccaaagtttgttaataaggagttgctacaa
atctacaaaacagacttagatgttggggtgaaaatcaagtttctgtttgaactaatcaaa
ctcagcaaaggagagaaggtcttggtttttagtcaatttctgatacccttaactttcata
ggagagttactgaaatcacacttcaattggtctgaaggaaatgagtatttactaatggaa
ggaaaacaaagaactaagttaaggcaatccttaataggacagtttaatgatcctttaagt
tcagcaagggttcttttagcttcaacaaaggcgtgctgtgaagggattcaccttgttggt
gcttcgagggtggtcttgcttgacgtggtttggaatccttctgttgaaagacaagctata
agccgagcctataggctcggacagaagaaggatgtgtatgtttatcaccttattacagcg
ggaacacttgaacgcgagaagtatgatagacaggtggcgaaagagcgtgtttctgaacag
gtgtttatttcatctgagggtgaaggattgaagacaaacacattgtcagggatttcagag
gatcggattcttgaagagatgattgaacatgagaaattgaagaatatgtttgagaagatt
atatatcagcctaaagctcataagttgattgaaagctttggtcctttaactttgtag
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