Spinacia oleracea (spinach): 110781752
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Entry
110781752 CDS
T05137
Name
(RefSeq) SNF2 domain-containing protein CLASSY 4-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110781752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soe03400
]
110781752
DNA repair and recombination proteins [BR:
soe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
110781752
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AT_hook
Motif
Other DBs
NCBI-GeneID:
110781752
NCBI-ProteinID:
XP_021841494
UniProt:
A0A9R0JNT2
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All DBs
Position
6:complement(147404121..147409638)
Genome browser
AA seq
1093 aa
AA seq
DB search
MENLPVGKRTRSQRARMLTEQNKKARLSAKREWRKKKKKKEGVSEGGSGKKDGILRGLKD
DDDDDGNAAMVIDKEEFIKFSELEEKSEIEEMGIVKKEAFDLSELGKVSEIQKLGFVKGE
TFDLSELVKETEIEEMGIIKEEVFDFVHQQNGLNGDESDDSLQILGERWNPLGLNDDNDD
DDDDDANDDGCNHPLVVEISSDEDGDERKVDEVKNGGKSEEKEEDAVISEESSSSSSSEE
DDDKDFMGEESESSDDSDQSSSSSSSSDCSVQEVDETKLHYSDNVDDNVDDDEEVVGEED
VVISEKYDDHKSKHIENRERIEVESGEKRKRGRPRKNTNTFVLESQSPSNNRVKKSSKDN
ELQNTILNTILQVGNDGLDEILCNANKSYLPLKFEYGVTKIVEVEKEEEELEVDSLFKEL
EFSYQACKIGANDIPMYDNDGDNEDDPTNEAISQKDLCAKGKHYLILDDEIGVICKFCSH
VYLEIKHVTPDFNKNLFGRGNRREYDRFLYEDKISCNGFQFPDSSYDRRGDYDYPNPLED
VQGTVWDLVPGVKATLYPHQRDGFEFIWKNIAGSIKIDELGNPSSYGLGGCIICHAPGTG
KTRLAIVFLQSFMKQYKMANPVIVAPCSMLRTWEEEFKTWNVDIPFFSLNDHDLSGKEDP
KILNYAGDTKDKKTIRSIKLLTWASGKGVLGISYSLLQRLAGEQEGADEKVREILIRKPG
ILVLDEGHTPRNEKSNIWKVLSQLSTKRRVILSGTPFQNNFEELHNIISLVREEAEGPVL
SGYYEQDDRRIAQLRKRIKPFVHVHKGEILRQTLKGLFHSLIILKPSSLQKLCFDHLARV
RLSCFSFDNFVSLTSVHPSIFCNKNVRNPSFIDDEFKDLLKKHKMDLDAGVKTRFLVELI
EMSKGERVLVFGQYIPPLIFIGNLLKIVFGWTMGSELLYMHGQQDLKERQSMIKVFNDPR
SEARVLLASTKACCEGIHLVGASRVVLLDVVWNPSVERQAISRAYRLGQKKDVFVYHLIT
SGTLEEDKYQRQASKERLGELMFASSEEERMEKKSTKRSRISEDRVLEEMLHNEKMKDLF
VRIIYHPKNDDFI
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggagaatttaccagtagggaagagaacaaggagtcaaagagcaagaatgttgactgaa
cagaacaaaaaagcgcgtttgtctgcaaagagagagtggaggaagaagaagaagaagaag
gaaggagtttccgaaggcggcagcggaaagaaagatgggattttgagggggttaaaggat
gatgatgacgatgatggtaatgcagctatggttattgacaaagaagaatttattaaattt
agtgaattagaggagaaatcagaaattgaggaaatgggtattgtaaaaaaagaagctttt
gatttgagtgaattgggaaaagtatcagaaattcagaaactgggttttgtaaaaggggaa
acttttgatttgagtgaactggtcaaagaaacagaaattgaggaaatgggtattattaaa
gaggaagtttttgattttgttcatcaacaaaatggactgaatggggatgagagtgatgat
tcgttgcagattttaggagagagatggaatcctcttgggttgaatgatgacaatgatgat
gatgatgatgatgatgcaaatgatgatggatgtaatcatcctttggttgtggagataagt
tcggatgaggatggtgatgaaaggaaggttgatgaagtcaaaaatggtgggaaatctgag
gaaaaagaagaagatgctgtgatttctgaagaatcttcaagtagtagtagttctgaggaa
gatgatgataaggattttatgggtgaggagagtgaatcctctgatgattctgatcaaagt
tcaagttcgagttcgagttcagattgttctgttcaagaagttgatgaaacgaaattgcat
tattctgataatgttgatgataatgttgatgatgatgaagaagttgtaggtgaagaagat
gttgttatcagtgagaaatacgatgatcataaatcgaaacacatcgaaaatagagagaga
attgaggttgagagtggagaaaagaggaaaagagggaggccaagaaagaataccaacaca
ttcgtgttagaatctcaatcaccttctaataatcgagttaagaagtcatcaaaggataat
gaactacaaaacactatccttaatactattttgcaggttggaaatgatggattagatgag
attttgtgtaatgcaaataagagttatcttccattgaagtttgagtatggagtaacaaag
atagttgaggtggaaaaggaagaagaagagttagaagttgatagtcttttcaaggagctt
gagttttcttaccaagcttgcaaaattggtgctaatgatattcctatgtatgataatgac
ggtgataatgaagatgatcctaccaatgaagccatttcacaaaaggacctttgcgcgaaa
gggaagcattatctcattctagatgacgaaattggagtaatttgcaaattctgctcacat
gtatacctggagataaaacatgttacaccagattttaacaagaacctttttggaagagga
aacagaagagaatatgacaggttcctatatgaagataaaatatcatgtaacggatttcag
tttcccgattctagctatgatcgccgaggtgattatgattatcctaacccgttagaagat
gttcaaggtacggtgtgggacctcgttcctggtgttaaggctaccttataccctcaccaa
cgcgacgggtttgagttcatatggaagaacatagcaggaagtatcaaaattgatgaactt
ggtaaccctagctcatacggtttaggtgggtgtatcatctgccatgctcctggaaccggg
aaaacccgtttagcaattgttttcctacaatctttcatgaagcaatacaaaatggcaaac
cctgtaattgtcgcgccatgtagcatgcttcgaacatgggaagaagagttcaaaacatgg
aatgttgacatacctttcttcagcttaaatgatcacgatctttccgggaaagaagaccca
aagatccttaactatgcaggggatacaaaagataagaagacaatccgttctattaagctg
ttaacttgggcttcggggaagggcgttttggggattagctattcgcttctacaaagactt
gctggtgaacaggagggtgcagatgagaaagtcagggaaattctgatcagaaaacccggc
attttagtgttagacgaaggtcatacaccgaggaatgaaaagagtaacatatggaaagtg
ttgtctcagttatcaacaaagagaagagtgattttatcaggaaccccgtttcagaataac
tttgaagaactccataacataatatccttagttagggaagaagctgaaggtccggtttta
tcaggttattatgaacaagatgataggagaattgcacagttgaggaaaaggattaaaccc
tttgttcatgttcataaaggtgagattttaagacagactctcaaaggactatttcattca
ctgattatcttaaaaccatctagtttacagaagctgtgttttgatcatttggcaagggta
agattaagctgtttctcatttgataatttcgtctctttaacatcagttcatccttcaatc
ttttgtaacaaaaatgtcagaaaccctagttttattgatgatgaattcaaggatttgcta
aagaagcacaagatggaccttgatgcaggggtgaaaacccggttcttagtagaactcatt
gagatgagtaaaggtgaaagagttcttgtgtttggacaatacatacctcctttgatcttc
ataggaaatttactaaaaatagtttttggttggactatgggaagtgaattgctttatatg
cacgggcaacaagatttgaaggagaggcaatcaatgataaaggtttttaatgatcctaga
agtgaagctagggttcttttggcttcgacgaaggcgtgttgtgaaggtatccacctcgtg
ggtgcctcgagggtagttttgcttgacgttgtttggaatccttcagttgaaaggcaagct
ataagccgagcttataggctcggacaaaaaaaagatgtttttgtttatcatttgattact
tcgggtactcttgaagaagataagtatcagagacaggcaagtaaggaacgtttaggggag
ttaatgtttgcttcttcggaggaggaaagaatggaaaagaagagtactaagaggtcaagg
atttcagaggatcgtgtgcttgaagaaatgttacataatgaaaaaatgaaggatttgttt
gtgagaattatctatcacccgaaaaatgatgattttatctga
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