Spinacia oleracea (spinach): 110781954
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Entry
110781954 CDS
T05137
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe00040
Pentose and glucuronate interconversions
soe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110781954
Enzymes [BR:
soe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110781954
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110781954
NCBI-ProteinID:
XP_021841694
UniProt:
A0A9R0I2Z2
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Position
2:complement(109312582..109316442)
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AA seq
382 aa
AA seq
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MASKMVYIAILSSFLLAMGPESCLGKRPRLATFNSIDGCWRRNLNWFNNREELAKCSVGF
AGKMINNVGEDVKKYVVTDPTDNPTSPKPGTLRYGVTMVPGKVWISFQKDMYIKLERTLL
VGSYTTIDGRGAVVHITNGCLLLYQVTNVIIHGLRIHHCRTQPAGPIMGPGAKLMPISQM
DGDAIRLLGSTKVWIDHNTLYRSEDGLIDVTLGSTNVTISNNWFRDHDKVMLLGHDDDYN
DDKNMKVTVVYNRFGPNCNQRMPRVRHGYAHVANNLYLGWEIYAIGGSMDPSVKSQSNLF
VAPKTGSKEIIMSINDKKNGKGLQNFKSVGDVLENGATFKETGSGYVKPNYNKDEKFPVE
SGNAVRQLTRSAGALRCRGRVC
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggctagtaaaatggtttatatagccattttatcctcatttttactagccatgggacca
gagtcttgtttgggtaagagaccaaggctcgcaacatttaattccattgatggttgttgg
cgaaggaaccttaattggttcaacaacagggaagagcttgcaaaatgctcagtgggcttt
gcaggtaagatgatcaacaacgttggcgaagacgtgaagaaatatgtggtcactgatcct
actgataaccccacaagccctaaaccaggaactcttagatatggtgtgacaatggtacct
gggaaagtatggatctcgttccagaaagacatgtacattaaacttgaaaggactcttctt
gttggaagctatacaactattgatggccgaggtgctgttgttcatattaccaatggatgc
ctcttgctctaccaggttactaatgtgataatccacgggttgcgaattcaccattgtcga
acccaaccagcaggcccaattatgggacctggtgcaaagttgatgccaattagtcaaatg
gacggggatgctattaggttgctaggatcaacaaaggtgtggattgaccataataccctt
tataggagtgaggatggtctaattgatgtaacccttggctccaccaacgttaccatctcc
aacaactggttccgtgaccatgacaaggtcatgctattaggtcacgatgatgattacaat
gacgataagaacatgaaagttactgttgtctacaaccgttttggtcccaattgcaaccaa
cgcatgccaagagttcgtcatggttatgctcacgtagctaataacttatacctaggatgg
gaaatttacgctataggaggaagcatggaccctagtgtaaagagtcaatccaacctcttc
gtagcgccaaaaactggatctaaagagattataatgagcatcaacgacaagaaaaatgga
aaaggattacagaattttaaatcggtgggtgatgtattggaaaatggagctactttcaaa
gaaacaggatcaggttatgtgaagccaaactataacaaagatgaaaaatttcccgttgaa
agtggtaacgctgtaaggcaactaacaagatcagcgggggctttacgttgtagaggaaga
gtatgctaa
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