Spinacia oleracea (spinach): 110782036
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Entry
110782036 CDS
T05137
Name
(RefSeq) putative DEAD-box ATP-dependent RNA helicase 29
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
soe03009
]
110782036
Enzymes [BR:
soe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110782036
Ribosome biogenesis [BR:
soe03009
]
Eukaryotic type
Pre-60S particles
Helicases
110782036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
110782036
NCBI-ProteinID:
XP_021841790
UniProt:
A0A9R0I3T9
LinkDB
All DBs
Position
2:109844079..109854522
Genome browser
AA seq
820 aa
AA seq
DB search
MANNRTGGFLVSSQSELIHKEKKEKKSKSGGFESYNFCPNVFNAIKRKGYKVPTPIQRKT
MPVILAGADVCAMARTGSGKTAAFLIPMLEKLKQHVPQQGIRALILSPTRDLALQTMKFC
KELGRYTDLRMSLLVGGDSMENQFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVV
FDEADTLFDSGFAEQLHKILTQLSESRQTLLFSATMPSALAEFAKAGLRDPQLVRLDVDK
KISPDCKFVFFTLRPEEKQAALVYLIREVINPNEQMLIFVSTRHHTEFLRLLLSLEGIES
NVCYGDMDPEAHRISISKFRSGKIKMLIVTDVASRGIDIPLLDNVINWDFPSNPKMFVHR
IGRVARNGRTGTAYSFVTPEDLPYVLDLHLFLSKPIRPAPSEEEVLKDINGVIDKIDQAM
ANGVTVYGRFPQTVIDLVQDKVRDDIDSSADLYALQRSCTNAFREYSRSKPAPSSASIRR
AKELSREGLHPMFKGVLQGNELSALAFTERLKSFRPKQTILEAEGRAAMSKRLKGSSSQW
VDVMKKKKAIHESIINQVHKQSSIDKAAKEDEPDFISVETKEKKETVGSKRKARSFKDDE
FFINPVPTNQHSEAGLSVRASQGFGSNRLDSAVMDLVADDKVGMQRQKTIYHWDKKSKKY
IKLNNGDRVTATGKVKTEGGQKVKAQRTGIYKKWKASTHNKIAFKGTDNGDHGASTSTSG
FAGGRFNNRFNGRNQQRPIPNANVPSEIKNLEQVRKERQKKATKLSLMKQNSKKDKFGRT
GKKRQGGKGAPAGKGGKGGHGGKGGPGGKGGKGGKGGKAW
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaaccgcaccggaggtttcctagtaagctctcaatcggagctaatacacaaa
gagaagaaggagaagaaatcgaaatcaggtggatttgaatcctacaatttttgcccaaat
gttttcaatgcaatcaaaaggaagggttacaaagtaccaaccccaattcagcgcaaaact
atgcctgtcattctcgctggcgctgacgtctgcgccatggctcgtactgggtctggtaaa
acggcggcgtttcttatccctatgttggagaaattgaagcagcatgttcctcagcagggt
attagggctttaattttgtctccgactagggatttggctcttcagactatgaaattttgc
aaggagttgggccgttacacagatctccgtatgagtcttctagttggtggggattcaatg
gaaaatcaatttgaagaattggctcaaaatcctgacatcattattgccacaccgggtagg
ctgatgcatcatttgtctgaggtagatgacatgacacttcgaacagtggaatatgtggtc
tttgatgaagccgatactttatttgattcgggttttgctgagcagttgcataaaattctg
acacagttgagtgagagtcggcagactttgctgtttagtgcaactatgccaagtgctttg
gcagagtttgctaaggctggtctgcgagatcctcagcttgtgcgcctagatgtggataaa
aaaattagtccagactgtaaatttgtctttttcacgttgaggccggaagagaaacaggca
gccttagtgtatttgattagggaggtaatcaatcctaatgagcaaatgttaatctttgtt
tccaccagacaccatacagaattcctcagattgttgctttcactagagggtattgagtcc
aatgtgtgttatggtgatatggacccagaagctcacagaattagcatttcaaagttccga
tctggaaaaattaagatgcttattgttacagatgtggcttctagaggcatagatattcct
ttgcttgataatgtaattaattgggactttccttcaaatccgaaaatgtttgtgcaccgt
attggaagagtagctaggaatggtcggactggtacagcgtactcttttgtgacgcctgaa
gacctgccttacgttttggatcttcatctctttttgtcaaaacccatcaggcctgctcca
tcagaggaggaggttctaaaggatataaatggggttatagataaaatcgatcaagctatg
gccaacggtgtgactgtatatgggcggtttcctcagactgttatagatcttgttcaagat
aaagttcgggatgacattgattcatctgcagatttatatgctctgcagaggtcttgtact
aatgcattccgtgagtattcaaggtcaaaacctgcaccgtcgtcggcatcaatccggagg
gcaaaagagttatcccgtgaaggtttgcatcctatgttcaaaggtgtgttgcaaggcaat
gagctgagtgctttagcgttcactgaacgcttgaaatctttcagacccaagcaaacaatc
ttggaagctgaaggtcgtgctgcgatgtcaaaacgtctaaagggttcttctagtcaatgg
gttgatgtgatgaaaaagaagaaggccatccatgagtcgattattaaccaggtgcataag
caaagctccattgataaggcagccaaggaagatgaacctgacttcatttctgtcgagaca
aaggagaaaaaagaaactgttggttctaaaaggaaagcaaggagcttcaaggatgacgag
ttttttatcaatccagtgccaacaaaccagcattcggaggctgggctctcggtacgagct
agccaaggctttggatcaaataggttggattcagctgttatggatctagttgcagacgat
aaagtgggcatgcagagacaaaaaaccatctatcactgggataagaaaagtaaaaagtat
atcaagcttaacaatggtgatcgtgtaactgcaactggaaaggttaagactgaaggaggg
caaaaagtgaaggctcagagaactgggatttataaaaagtggaaagcaagtacacacaat
aaaattgcctttaaaggaactgataatggagaccatggtgcatcaacatcaacctctggc
tttgcaggtggtcggtttaataacaggttcaacggacgcaaccaacaacgaccaatacca
aatgcaaatgttccatcggaaatcaaaaaccttgagcaagttcgtaaagagagacaaaag
aaggcaactaaactatctcttatgaagcagaattcaaagaaggataaatttggtagaact
ggcaagaaacgacagggcggaaaaggtgcaccggccggaaagggcgggaaaggtggacat
ggcggaaaaggtggaccgggcggaaaaggcggaaagggtggaaaaggcggaaaggcctgg
tag
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