Spinacia oleracea (spinach): 110782046
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Entry
110782046 CDS
T05137
Name
(RefSeq) small RNA degrading nuclease 5
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110782046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
soe03009
]
110782046
Ribosome biogenesis [BR:
soe03009
]
Eukaryotic type
Pre-60S particles
RNases
110782046
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
Dmd
Motif
Other DBs
NCBI-GeneID:
110782046
NCBI-ProteinID:
XP_021841799
UniProt:
A0A9R0I373
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Position
2:109661538..109672345
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AA seq
604 aa
AA seq
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MLHLPYPPPFSCSFLLPSPSFSPKLIYRNLSMNSIEPTKETLISTDEQSENHNDNSSKTY
FDIYGPQARAEVVLNTPEANSTLSLEDVQGLVTWVLADGFMPPWVFIKNKPLIPKVALLY
IPGLDAALYMSHTKKFSNLKKCCGNPRAVQALSCLLDGIQTIDALLTCKFKRKRDEPDLA
SKKPDESSVKETSSTPNNISPIELMKNLPFPVTYYTLTKKQLEDNGYCLNQPDFCSTCPA
PSGTSPCEMLALDCEMCITCNGFELTRVTLVDVKGQVMLDKLVKPSNPIVDYNTRYSGIT
PEMLNDVSTSLEDVQEEFLKLVYKETILIGHSLENDLLALKVSHDLVIDTAVLYKHPRGG
SYKTALRVLARRFLSKEIQNSECGHDSIEDARTAMELAFLKIKNGPDFGSPRQFLRKKLV
NVLSESGKTSSFIDDVSIVKRYASGTCHAFPVSSDDEALSRASKEVKNDKVQFVWTQFSE
VNAYLKKQADDDEKFNARLAELIAFLTCQNKSSAKKGIKCSIPSTFKEILTRTDSRIYKL
YSNLPVNSMLIVFTGQGDTAIIHRLRKMLTEEAKTEVCREKLIKVLEELQAQAEVGLCFV
GIKH
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcttcatcttccctaccctccgccattctcctgctcctttctacttccttctccttca
ttttcccccaaattaatttacagaaatttaagcatgaattccatagaaccaactaaagaa
accctaatttccaccgacgaacagtccgaaaatcacaatgacaattcttccaaaacttat
ttcgatatttatggacctcaggcaagagctgaggttgtgttgaatacacctgaagctaat
tctactttgagtttggaagatgttcaagggttagtaacatgggtgcttgctgatggtttc
atgcccccttgggtatttatcaaaaacaagcccctcatcccgaaagtggctcttctatat
attccaggccttgatgcagcattatacatgtcgcacacaaaaaagtttagcaatttgaaa
aagtgttgtggcaatccaagggcagttcaggctttaagttgtttattagatggtattcag
acaattgatgcgcttctgacatgcaagttcaaaagaaaaagagatgaacctgatttagcc
tccaaaaaacctgacgagtcctctgtaaaagaaactagttctactccaaacaatatatcc
ccaattgagcttatgaagaatttaccattccctgtcacgtattatactctcacaaaaaaa
cagctggaggataatggatattgcctcaatcaacctgatttctgttctacctgccctgca
ccttctgggacttctccttgtgaaatgttagctcttgattgtgagatgtgtatcacatgc
aatggattcgagctgacgcgggtgacactcgtagatgttaaaggtcaggtcatgttggac
aagctggtgaagccatctaaccctattgttgattacaacacaagatatagtggaataaca
cccgaaatgttgaatgatgtatctaccagtcttgaggacgtgcaggaagaatttttgaag
cttgtttataaagagacaatcctgatcgggcactcattggagaatgacttgctagcatta
aaagtatcacatgatttagtaattgatactgcagtattatataagcatcctcgtgggggc
tcatataaaaccgctcttcgggtgcttgccagaagatttctgtcgaaagagatacaaaat
tcagagtgtggccatgacagcatagaggatgctaggacagctatggaactggctttccta
aaaataaaaaatgggcctgattttggctcacctcgacaatttttgcggaagaagcttgtc
aacgtgttaagtgaatctggcaaaacatcatcattcattgatgatgtttcaattgtgaag
cgttatgcttctgggacatgccacgcgtttcctgtttcatctgacgatgaagcactttct
agagcttctaaagaggtaaaaaatgacaaggtgcaattcgtgtggactcagttctcagaa
gtaaatgcctatttgaaaaaacaagcggatgacgacgagaaatttaatgcaagactagcg
gagttgatagcatttcttacttgtcaaaataagtcttctgcaaagaagggaataaagtgt
agtataccatcaacgttcaaagagatcctaacccgtacagattccagaatttacaagctc
tattcaaatttacccgtaaatagtatgcttatcgtatttaccggtcagggagatactgca
ataatccacagactgcgaaagatgctaacagaagaagccaaaaccgaagtatgccgtgaa
aaactaataaaggtcttggaagagctacaagctcaggctgaagtaggtctgtgttttgtg
ggtataaaacattga
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