Spinacia oleracea (spinach): 110782411
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Entry
110782411 CDS
T05137
Name
(RefSeq) RING-H2 finger protein ATL16-like
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
soe04121
]
110782411
Enzymes [BR:
soe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110782411
Ubiquitin system [BR:
soe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110782411
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
Prok-RING_4
zf-RING_16
SLX1_C
PRIMA1
zf_RING_Vps8
zf-RING_4
Gmx_para_CXXCG
Prok-RING_1
zf-C3H2C3
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
110782411
NCBI-ProteinID:
XP_021842258
UniProt:
A0A9R0JPW7
LinkDB
All DBs
Position
5:2086377..2087856
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AA seq
359 aa
AA seq
DB search
MDSSTKLQWQPPPPLQPPPPPPPPSHISSTSDFPIAIALLAIMAVAILLISYYIFVIKCC
LNWQNLDPLRRFSISRTPRNDEGSIISFSPMMEPFHHRGLDEFLINNIPSIQYKSATQGG
TLAALGGGGGGGGGGSRSFRGCAVCLNKFEEKEMLRVLPRCNHTFHLDCIDVWLLNNASC
PLCRSNISGRKTKYPLIAPSSSPQEELIISPNNMFSGSLSMISLNGDDDQDYLVTEESSS
SWKLNNNNHNNNFSIMGDECIINVREKDEQFEVQQPIRRSFSMDSVADRGLILQVQEIIR
RNHRQLYDNCNNNEVSISLNEECNHNNVGNGRIRRSSFFSFGHGRGSRSSSILPIECDR
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggattcatccaccaaactccaatggcaaccaccaccaccactacaaccaccaccaccg
ccgccaccgccaagccacatttcatcaacctcggatttccctatagcaatagcattatta
gccattatggcagtagccatcctccttataagctactacattttcgtaatcaagtgttgc
ttaaattggcaaaacctcgaccctttacgaaggttctcgatttcgaggaccccacgtaac
gacgaggggtccattatctcgttctccccgatgatggaacccttccatcatcggggactc
gacgagtttctcatcaacaacatcccttcaatacaatacaagtccgccacccaaggcggc
acgttagccgccctaggtggtggcggcggcggcggtggtggtggaagtagaagttttaga
ggttgcgccgtatgcttaaacaaattcgaggagaaagaaatgctaagagttcttccaagg
tgtaaccacacatttcacttagattgcattgatgtttggctcttaaacaatgcaagttgt
cctctttgtaggtcaaatatttcaggaaggaagactaaataccctctcattgcaccgagt
tcttcgcctcaagaagaactaatcatctcccctaataatatgtttagtgggagtttaagc
atgattagcttaaacggggatgatgatcaagattatttagttactgaagaatcatcgtca
tcgtggaagttgaataataataatcataataataacttctccattatgggagatgagtgt
attattaatgtaagggagaaagatgagcaatttgaggtgcaacaaccaattaggaggtct
ttctcaatggattcggttgcggatcgtgggttaatcttgcaagttcaagagattataagg
aggaatcataggcaattatatgataattgtaataataatgaggttagtattagtttaaat
gaagagtgtaaccataataatgttggtaatggaaggattaggaggtcgtcttttttttca
tttggtcatggtcgaggttctagaagttcttcaattcttcctattgagtgtgatcgatga
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