Spinacia oleracea (spinach): 110782420
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Entry
110782420 CDS
T05137
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
soe03009
]
110782420
03036 Chromosome and associated proteins [BR:
soe03036
]
110782420
Enzymes [BR:
soe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110782420
Ribosome biogenesis [BR:
soe03009
]
Eukaryotic type
Pre-60S particles
Helicases
110782420
Chromosome and associated proteins [BR:
soe03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
110782420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
CMS1
ResIII
CPSF100_C
Motif
Other DBs
NCBI-GeneID:
110782420
NCBI-ProteinID:
XP_021842265
UniProt:
A0A9R0JPY2
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All DBs
Position
3:1330223..1335865
Genome browser
AA seq
685 aa
AA seq
DB search
MPSISMMSDAITPETLKKEKKMKSETLDSDDTVVKKEKSSSKKKEKSSSSGKKDKEEKEK
KKKRKAVDLDDSSDKSDNSSELVQADDLKPKKAKVMEEAVVEAEDPNSLSNFRISKPLKD
VLISKGIKALFPIQAMTFDNVIDGCDLVGRARTGQGKTLAFVLPIVESLVNGRTKDLRRS
GHGRLPSVLVLLPTRELATQVLADFQVYGGAVGLTACSVYGGAPFHSQISSLTRGVDIVV
GTPGRVKDLLEKGVLKLGSLLFRVLDEADEMLKMGFVDDVELILGKVDDVSKVQTLLFSA
TLPSWVKQISTRFLKSAKKTVDLVSDQKMKASISVRHIVIPCSASARPDLIPDIIRCYGS
GGRSIIFTETKESASQLAGLLTGARPLHGDIQQTQREVTLKGFRTGKFMTLVATNVAARG
LDINDVQLIIQCEPPRDVEDYIHRSGRTGRAGNTGVAVMLYDPKRSSVTKIERESGVKFE
HLSAPQPVDVAKAVGIEAAAAILQISDSVIPAFKDAAEELLSTSGLSAVDILSKALAKAA
GYSDIKERSLLTGMEGYVTLLLDAGRPFYGQSFAYTVLKRFLPATKADSIMGVALTADKS
GAVFDVPVDDLETFLVGAENAAGVNLDVVKALPPLEEKVQISRRFGGGGRGGRGGGYGGR
GGGYGGGGYGGGGGYGGRGGGYGRR
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgccttcaatctccatgatgtccgatgctatcacaccagaaaccctaaaaaaggagaag
aagatgaagtctgaaaccctagattccgacgacaccgtcgtcaagaaggaaaagagcagc
agcaagaagaaggagaagagtagtagtagcggtaaaaaggataaagaagagaaggaaaag
aagaagaagcgtaaagctgttgatttggatgattcttctgataagagtgataacagctct
gaattggttcaggctgatgatttgaagccgaaaaaggctaaagttatggaagaggctgtt
gttgaagctgaggaccctaattcgctttcgaattttcggatttcgaagccgttgaaggat
gttttgatttcgaaagggattaaggcgttgtttcctattcaagctatgacgtttgataat
gttattgatggttgtgatttggttggccgtgctcgtactggtcagggaaaaacacttgct
tttgtgttaccaatagtagagtctctagttaatgggcgcaccaaagatttaaggagaagt
ggccatggaaggttaccgagtgtcctggttcttctgcccaccagggaattggcaactcag
gtgttggctgatttccaagtttatggaggtgcagtaggacttactgcttgtagtgtttac
gggggagcgcccttccattctcagataagtagcttaaccagaggtgttgatattgttgtt
ggaacacctggcagagtgaaggatctcttagagaagggtgttcttaaactcggttcactt
ctattccgagtccttgacgaggctgatgagatgttgaaaatgggttttgttgatgatgtt
gaattgatcctaggaaaagttgacgatgttagcaaagtccagactcttctcttcagtgct
accttgccctcctgggtcaagcagatatctacaaggtttctcaagtctgcgaagaaaacc
gtagatcttgtaagtgatcagaaaatgaaggccagtataagtgttaggcacattgtcata
ccatgttctgcctctgcaaggcctgatctcattccagatatcattcgttgttatggcagt
ggaggccgttcaattatttttaccgagactaaagaatctgcctctcaacttgctgggcta
ttgactggagcgcggcctttgcatggagatattcaacaaacacaacgagaggtaaccctc
aaaggatttagaactggaaaatttatgaccttggttgcaacaaatgtagcagcaagaggt
ctggatattaatgatgtgcagctaatcatccaatgcgaacctccccgcgatgttgaagac
tacatccatcgttcaggacgaacgggcagggctggaaacacgggagttgctgttatgctt
tatgatccaaagaggtctagtgtcactaaaatagaaagagaatctggtgtgaagtttgag
catttatctgccccccaacccgttgatgttgccaaagctgttggtattgaagcagcagct
gccatcctccaaatttctgatagtgtgattcccgctttcaaggatgctgctgaagagctt
ttgagtacatctggtctatcagccgtggatatactctcaaaagcccttgccaaggccgct
ggttactcggatataaaggaaagatcacttctaaccggcatggagggttatgtaactcta
ctccttgatgcaggaagaccattttatggacaatcttttgcctacactgtattgaagagg
ttcttgcccgcaacaaaagctgattcaatcatgggggttgcactaaccgctgacaagagt
ggtgccgttttcgacgttccagttgacgatttggaaactttccttgttggcgcagaaaat
gctgcaggggtgaacttggatgtagttaaagccttgcctccattagaagagaaagtacaa
ataagcagaagatttggcggtggtggaagaggcggccgtggtggcggatatggaggacgt
ggtggtggatatggtggtggaggatatggtggtggaggaggatatggaggacgtggtggt
ggatatggtcgtcgttaa
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