Spinacia oleracea (spinach): 110782493
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Entry
110782493 CDS
T05137
Name
(RefSeq) single-strand DNA endonuclease 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soe03400
]
110782493
DNA repair and recombination proteins [BR:
soe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
110782493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chromo_SEND1
XPG_I
XPG_N
Chromo_2
Chromo
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
110782493
NCBI-ProteinID:
XP_021842362
UniProt:
A0A9R0I4D9
LinkDB
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Position
3:2252981..2260525
Genome browser
AA seq
768 aa
AA seq
DB search
MGVKNMWDILESCKKTLPLHHLQNKRVCIDLSCWMVQLQNVNRSHCAMKEKLYLRGLFHR
VRALISLNCSVIFVTDGAIPAIKISTYRRRLNSVNEVTQDDVDRQKVTSLRRNMGSEFSC
MIREAKNLGKALGIPCLDGIEEGEAQCALLNSESLCDGCFTSDSDVFLFGARTVYRDICL
DKGGYVVCYEMNDIEKKLGLGRHSLIALALLLGSDYCHGVRGFGPDKACQIVRSVSEDVV
LQRVASEGLSFLKSLKTSRKNGKASERPGKENFPDPQIQATGDNPPLEKDYEVLPVIEAY
MKPECHSADSDPVYRVLAVHPFQRAELQELCSKFFGWPPEKTDEYILPRIAERELRKFAN
LRLSSSQLGVALPLHSMPVKCPISEVVKHRKVQGRESFEVSWEDFDGLETSIVPADLVQR
ACPEKIAEFEERKLQKKKQNRRKPKPKNSDNMSSVANVDAKLQSLLLDIESEDNKRFNNP
TSKHNNNNDNNNNSRPKKSEEEVSRTTDNSRTENPLIEIDSEDNATYKLTSCYSTSESGS
SIEDLTVSDKFLYEEYDSNIVIDVPTSMEVSRTGNDPCVELPIHQHTGLRTEIPLIEIDC
EDNAATYKLTSCYSTSISGSSIEDLTVSDKFLDEEYDSNIVIDVPTSMEVSRTGNDPCVE
LPTRGLRTENPLIEIDFEDNASYKLTVSDKFLDEEYDSNIVIDVPTSMETDVIDLLSPSP
LLRTRYVSKCQTIVEQVSVIDLSDSEMEISPDHARKARELRLFLSSIR
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgggggtaaaaaatatgtgggatatcttggaatcctgcaagaaaaccttaccgcttcac
catctccagaataagagggtgtgcatagacctgtcatgttggatggtgcagcttcaaaat
gtgaacagatcacattgtgcaatgaaagagaagctttatttgaggggtctttttcatcga
gtgagggcgcttatttctttgaattgcagtgttatttttgtcactgatggagctatcccg
gccatcaaaatctctacgtacagaaggcgcttaaattcagtaaatgaggttacacaagat
gatgtagacagacagaaagttacttcccttcgaagaaatatgggctctgaattctcttgt
atgatcagagaggcgaaaaacctcggcaaggcgcttggcattccttgcttagatgggatt
gaggaaggcgaagcacaatgtgctttactaaactcggaatcactttgtgatggatgtttc
acatctgattcagatgtcttcctttttggtgcaagaactgtgtatagagatatatgcctt
gataaaggaggatacgttgtttgctacgaaatgaatgacatagagaaaaagcttggactc
gggaggcactcactgattgcccttgcccttcttttaggaagtgattactgtcatggagtt
cgtgggtttggaccagataaggcatgccagattgttagatctgttagcgaagatgttgtt
cttcaacgtgttgcttcagagggtttatcttttttgaagtcactgaaaacctcgaggaaa
aatgggaaagcttctgaacgccctgggaaagagaactttccagatccccaaatacaggct
actggagataacccccctctagaaaaagattatgaagtattgccagtaatcgaggcatat
atgaagccagagtgtcactcagcagattcagatcctgtatatagggtcctcgctgtgcat
ccttttcagcgtgctgagcttcaggagctttgttctaagttctttggatggcctcctgaa
aaaacagatgagtatatccttccaaggattgctgaaagagagctgcggaaatttgccaat
ttgcggttgtcttcctcacagttaggagttgcacttccattgcactcgatgccagtaaaa
tgtcctatatctgaagttgtaaagcacagaaaagttcaaggtagagaaagttttgaggtt
tcatgggaagattttgatggccttgaaacatccatcgtaccagctgatcttgtacagaga
gcttgtcctgagaagattgcagaattcgaggagaggaaacttcagaaaaagaaacagaat
cgccgtaaaccaaaaccaaaaaactcagacaacatgtcctctgtggccaatgttgatgca
aaactccaaagcttgttacttgacatcgagtctgaggacaacaaaagattcaacaatcca
acctcgaaacataacaacaacaacgacaacaacaacaacagtagaccaaagaaatcagaa
gaggaagtttctagaacaacggataattcaagaactgaaaacccgttgattgaaatcgat
tctgaggacaatgcaacatacaaattaacctcatgttacagcacatcagaatcaggaagc
agtattgaggacttaacagtttcggacaagtttctgtatgaagaatatgacagcaacatt
gtgattgatgttccaactagtatggaagtttctagaactggaaatgacccgtgtgttgaa
cttccgatccatcaacacacgggtttaagaactgaaatcccgttgattgaaatcgattgt
gaggacaatgcagcaacatacaaattaacctcatgttacagcacatcaatttcaggaagc
agtattgaggacttaacagtttctgacaagtttctggatgaagaatatgacagcaacatt
gtgattgatgttccaactagtatggaagtttctagaactggaaatgacccgtgtgttgaa
cttccgacccgtggtttaagaactgaaaacccgttgattgaaatcgattttgaggacaat
gcaagttacaaattaacagtttctgacaagtttctggatgaagaatatgacagcaacatt
gtgattgatgttccaactagtatggaaactgatgtgattgatcttttgagcccgtctcct
ttattaaggacacggtacgtgtcaaagtgtcaaactattgtagaacaagttagtgttatt
gatctgagtgattcagagatggaaatatcgcctgatcatgctcggaaagcacgagaactc
agactgttcctgagtagtatcagatga
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