Spinacia oleracea (spinach): 110782778
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Entry
110782778 CDS
T05137
Name
(RefSeq) uncharacterized protein LOC110782778
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
soe03009
]
110782778
04121 Ubiquitin system [BR:
soe04121
]
110782778
Ribosome biogenesis [BR:
soe03009
]
Eukaryotic type
90S particles
Other 90S particles
110782778
Ubiquitin system [BR:
soe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
110782778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Sof1
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
eIF2A
WD40_RFWD3
PROPPIN
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_1st
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
110782778
NCBI-ProteinID:
XP_021842712
UniProt:
A0A9R0I4K9
LinkDB
All DBs
Position
4:188441112..188453358
Genome browser
AA seq
452 aa
AA seq
DB search
MKVKVISRSTDEFTRERSQDLQRVFRNYDPSLRPQEKAVEYVRALNAAKLEKIFARPFVG
AMDGHIDAVSCMAKNPIYLKGIFSGSMDGDIRLWDIASRRTVCRFLGHQGAVKGLTASTD
GRVLVSCGLDCTVRLWNVPDPSVMGCDESSGGSSTASAVYTGQNAYRAVDHQWGGDLFAT
AGARLDVWDHNRSQPINSFEWGVDTVVSVRFNPGEPSVLATSGSDRSIAIYDLRLSTPAT
KIIMQTKTNSISWNPMEPLNFTAANEDCNCYSYDLRHLTQAKCVHQDHVSAVMDIDYSPT
GQEFVTGSYDRTVRIFSKNGGHSREIYHTKRMQRVFCVKFSGDASYIVSGSDDTNLRLWK
AKASEQLGVLLPREKKKHDYDEAVMKRYKHLEEVKRIVRHRHLPLAIYKAQILRRTIVAA
QRKKDDRRRAHSGPSSVQKKPLRQSKIHGQIE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttaaagtgatatcgcgttccacagatgaattcactcgggaacgaagtcaagat
ttacagagagtatttcgtaactatgatcccagtcttagacctcaggagaaggcagtggag
tatgttcgagctcttaatgctgctaaattagagaagattttcgcaaggccgtttgtcggg
gcaatggatgggcatattgatgcggtttcgtgtatggccaagaatccaatttatttgaaa
ggaatattttcaggttccatggatggagatattcgcctttgggatatagcctccaggcga
actgtttgtcgttttcttggtcaccaaggtgcggtgaagggtttgacagcatcaacagat
ggacgcgttcttgtatcatgtggacttgattgcactgtcaggctgtggaatgttccagat
ccttctgtcatgggttgtgatgaatcttctggtggctcttcaacggcttctgctgtttac
acggggcaaaatgcatacagagctgttgatcaccaatggggtggggacctttttgctaca
gctggagcacggttggatgtatgggatcataacaggtcacagccaataaacagctttgaa
tggggagtcgacactgtcgtatctgttcgttttaaccctggagaaccaagtgtgctggct
acatcaggcagtgatcgcagcattgcaatctacgatcttcgtttgtctaccccagcaacg
aagattatcatgcagacaaaaactaattcaatttcttggaatccaatggagccattgaac
ttcactgcggcaaatgaggattgcaactgctatagctatgatcttagacacctgactcaa
gccaagtgtgttcaccaagatcacgtctctgctgtgatggacattgattactctcctacc
ggtcaagaatttgttacagggtcttatgatagaacagtaagaattttctccaaaaatggt
ggccacagtcgggaaatataccataccaagaggatgcaaagggtcttctgtgtcaagttt
agtggggatgcttcttatattgtatctggaagtgatgacactaacctgcgcctgtggaaa
gctaaagcatctgagcaactaggagttcttcttcctagggagaaaaagaagcatgattat
gacgaggctgtaatgaaacgttataagcatcttgaagaggtgaagcgtattgtaaggcac
agacacttgcctctagcgatttacaaagcacagattttgagacgtacaatagttgcggca
cagcggaagaaagacgacagaagaagagctcacagtggcccatccagtgtgcaaaagaag
ccactgcgacagagtaaaatccatggccagattgagtga
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