Spinacia oleracea (spinach): 110782930
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Entry
110782930 CDS
T05137
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110782930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
soe03041
]
110782930
Spliceosome [BR:
soe03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
110782930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
DUF6139
Motif
Other DBs
NCBI-GeneID:
110782930
NCBI-ProteinID:
XP_021842896
UniProt:
A0A9R0I569
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Position
1:126765327..126772696
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AA seq
489 aa
AA seq
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MATLADSFLADLDDLSDNEADVVVEEDADGENMEEDIDGELADIESLNYDDLDNVSKLQK
SQRYTDIMQKVEDALQKGSEVPDHGIVLEDDPEYQLIVDCNALSVDIENEIIIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIGNEIDLTLVDLEGLLPSAIIMVVSVTASTTSGKP
LPEEVLQKTVEACDRAIELDSARKKVLDFVESRMVYIAPNISAIVGSAVAAKLMGTAGGL
SSLAKMPACNVQLLGAKRKNTAGFSTATSQFRVGYIEQTEIFQSTPPPLRMRACRLLAAK
TTLAARVDSTRGDLTGKTGRTLREDIRKKIEKWQEPPPPKIPKPLPVPDSEPKKKRGGRR
LRKMKERYAVTDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRMSAGPSKLAA
KVAKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHAHQLGSGTQSTYFSETGTFS
KIKSNLGRL
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcaactctagccgattctttcttggccgatctcgatgacttatcagacaacgaagct
gatgtcgtggtggaagaagatgcggatggagaaaacatggaggaggatattgatggagag
ttagctgacatagaatccctgaattatgatgatcttgataatgtttccaaactacaaaag
tctcaacgttacactgatataatgcagaaagttgaagatgcattgcaaaaaggttcggag
gttcctgatcatggaatagttttggaagatgatcctgagtatcagttgattgttgactgc
aacgcattgtcagtggatattgagaatgagattattattatccacaatttcatccgtgac
aagtaccgcctaaagtttccagagcttgaatctcttgttcatcaccctattgactacgct
cgtgttgtgaagaagattggtaatgaaatcgacttaaccctagttgatctggaagggctt
ctgccttctgctatcattatggtagtctcagtcactgcttccactaccagtggtaagcca
ctgcctgaagaagttttacagaagactgtcgaggcttgcgatcgtgcaattgagcttgat
tcagcaaggaaaaaagtccttgattttgtggaaagcagaatggtatatattgcaccaaat
atttcagcaattgttggaagtgctgtcgcagcaaaacttatgggaactgctggaggtttg
tcttcattagctaagatgcctgcttgtaatgttcagcttcttggggccaaaaggaagaat
acggcaggtttttcaacggcaacatctcaatttcgtgttggttatattgagcagacagag
atatttcagagtacgccccctcctttgagaatgcgtgcatgccgtcttttggctgcaaag
acaacccttgcagcccgagtagattcaacgagaggagatttaactggaaagactggaagg
acattacgtgaagatatccgcaagaagatcgagaagtggcaagagccaccacctcctaag
atcccaaaacctcttcctgtgcctgattcagaacctaaaaagaaaagaggtgggcgaaga
ctacggaagatgaaggaaagatatgctgtcacagatatgaggaagttggctaaccggatg
cagttcggtgtgcctgaagagagttctctaggtgatggtttgggagaaggatatggtatg
cttggtcaagctggaagtggaaagttacgcatgtctgctggtccgagcaagcttgcagca
aaagttgctaagaaattcaaggagaagcgctatggaagcagtggtgctacctcagggtta
acgtcaagtttggcatttactcctgtgcagggcattgaactttcaaatccgcaggctcac
gcacatcaacttggcagtggaactcagagtacatatttctctgaaacagggacattttca
aaaatcaagagtaacttgggtagactttga
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