KEGG   Spinacia oleracea (spinach): 110782993
Entry
110782993         CDS       T05137                                 
Name
(RefSeq) uncharacterized protein LOC110782993
  KO
K12828  splicing factor 3B subunit 1
Organism
soe  Spinacia oleracea (spinach)
Pathway
soe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:soe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110782993
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:soe03041]
    110782993
   03036 Chromosome and associated proteins [BR:soe03036]
    110782993
Spliceosome [BR:soe03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    110782993
 Complex B
    110782993
 Complex C
   U2 SnRNP specific factors
    110782993
Chromosome and associated proteins [BR:soe03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    110782993
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N HEAT_2 HEAT_ECM29 Htt_N-HEAT_1 XMAP215_CLASP_TOG Vac14_Fab1_bd Adaptin_N
Other DBs
NCBI-GeneID: 110782993
NCBI-ProteinID: XP_056684466
LinkDB
Position
5:complement(4169778..4177689)
AA seq 1274 aa
MASLDPEIAKTQEERKKMEQELASLSSLNYDTELYGNNAREDYVQSIPVDDDEDNADVMD
NEVARKLASYTAPKSLLKEMPGAGADYDDGLRKPQRIIDREDDYRRRRLDRVISPARHDA
FAMGDKTPDVGTRTYAEVMREEALKREKEETLRLIAKKMKEEEEQKKNMGEEKGAGGGDV
AAQAQSSLKRRNRWDKAQDKEPDESIAKKAKSSSDWDMADSTPGIGRWDATPTPGRLGDA
TPSARRNRWDETPTPGRSNDSDATPTAGGVTPGATPAGTWDATPKITGMATPTPKRQRSR
WDETPATMESATPMAGATPSGAMTPGVTPLGGADMATPTPNLRGPITPEQYNLMKWEKDI
EDRNRPLTDEELDSMFPPEGYKILDPPNSYVPIRTPARKLLATPTPMGTPLYQIPVEDRG
QQFDVGKEPANGLPFMKPEDYQIFGKLLNEENEDELSPEEQKERKIMKLLLKVKNGTPPQ
RKTALRQLTDKAREFGAGLLFNQILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPFV
HKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARA
FSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIE
HGLNDENQKVRTITALSLAALAEASAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKSIG
FIIPLMDALYASYYTKEVMFILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRSDIL
PEFFKNFWVRRMALDRRNYKQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMET
IEKVVTNLGASDINSRLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLP
QICGTIKWRLNNKSAKVRQQAADLISRIAVVMKGCGEEQLMGHLGVVLYEYLGEEYPEVL
GSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFV
PAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRV
CTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVT
PLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLMNYVWPNIFETSPHVINAV
TEAIEGMRVALGAAAVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPTLEDE
GENVYSRPELLMFV
NT seq 3825 nt   +upstreamnt  +downstreamnt
atggcgtcgttagacccagagattgctaagactcaggaggagaggaagaagatggagcag
gagctggcctctctttcttcccttaactatgatactgagctttatgggaataatgcgagg
gaggattatgttcagtcgattcctgtggatgacgatgaagataatgctgatgttatggac
aatgaggtggcccggaaattggcctcctatacggctcccaagtctcttttaaaggaaatg
ccgggtgctggggccgactatgatgatgggttgaggaagccacagaggattattgaccgt
gaggatgattaccgtcgaaggaggcttgatcgtgtaatttctccagcgaggcatgatgct
tttgcgatgggggataagaccccggatgttggtacgaggacttatgcagaagtgatgagg
gaggaggcgttgaagagggagaaggaggaaacgttgaggttaattgctaagaagatgaag
gaggaggaggagcagaagaagaatatgggcgaggagaaaggggctggtggtggtgatgtt
gctgctcaagctcagtcttcactgaagaggagaaataggtgggacaaagcacaggataag
gaacccgatgaaagcatagcaaagaaggctaaatcttcctcggattgggatatggccgac
tctacccctgggattggaaggtgggatgccactccgacgccagggagacttggtgatgcc
acaccttctgctcgcaggaataggtgggatgagacaccgacacctggccgttcaaacgat
tcagatgctacaccaacagctggtggggtcactcccggtgctactccagctggaacatgg
gatgccactccaaaaatcacgggtatggcgacgccaacaccgaagcggcagagatcaagg
tgggatgagactccagctaccatggagagcgcaacacccatggctggggcaaccccttct
ggggctatgacccctggtgtgacacctcttggcggggctgatatggctacacctactcct
aatttgcggggtcctattactcctgaacagtataacttgatgaagtgggagaaggatatt
gaggacaggaacagacctttgactgatgaagagcttgattccatgttcccacccgaaggt
tataagatattggatcctccaaattcgtatgtgccaattaggactccggctaggaagctc
cttgcaacacccactccgatggggaccccgctttatcaaataccagttgaagacaggggc
cagcagtttgatgttgggaaggagcctgctaatggattgccattcatgaaaccagaggat
tatcagatttttgggaagttattgaatgaagaaaatgaggatgagctatcacctgaggaa
cagaaggaaagaaagattatgaagctgctacttaaggtgaagaatggtacccctcctcag
agaaagactgcattacggcaactcactgacaaggctagagaatttggtgctggtctattg
ttcaaccagattttgcctttgcttatgcagccgacgttggaggaccaagaacggcacctt
ctggtgaaagttatcgacagggtgttatacaagcttgatgagttggttcgacctttcgtg
cacaagattcttgttgttattgagccactcttaattgatgaagactactatgctcgggtt
gaggggagagaaattatttcaaacttgagcaaagctgctggattggccactatgattgct
gctatgagaccagatattgacaatatcgatgagtatgtgaggaatacaactgcaagggct
tttagtgttgtggcttcagccctaggtattcctgctcttctgccatttttgaaggccgtg
tgtcaaagtaagaagtcatggcaagccagacacacaggtattaagattgttcaacagata
gccattttgattggttgtgccgtgttgccacacttgagatctttggtagaaattattgaa
catggtctcaatgacgagaatcaaaaggtcagaacaattacggcgctgtctctggcagct
ctagccgaggcttctgctccatatggtatagagagttttgactctgtgttgaaacctttg
tggaaaggtatcagatcacaccgtgggaaggtcttggccgcgttcctgaagtcaattggt
ttcatcatcccattgatggatgctctctatgctagctactatacgaaagaagtcatgttc
attttaattcgagagttccagtcaccagatgaagaaatgaagaagattgttctgaaagtg
gttaaacagtgtgttagcaccgaaggtgtagaggctgattacattagaagtgatattctt
ccagagttctttaagaacttctgggttaggagaatggcactggacaggagaaactacaaa
cagcttgtggaaaccacggtagagattgcaaacaaggtcggcgttgctgacatagtgggt
aggatagtggaggatcttaaagacgagagtgaaccctataggcgtatggtgatggaaaca
atagagaaagttgtgactaacttgggggcatctgatattaattcccgtttagaagagctt
ctaattgacggtattctttacgcttttcaagagcagacaagtgatgatgccaatgtcatg
cttaatggtttcggcgctgtggttaacgccctcggccaaagggtcaaaccttatctccct
cagatatgtggtacaattaagtggcgtttgaataacaagagtgcaaaggtaagacaacag
gctgcggatctcatctcccgaattgctgtggtcatgaaagggtgcggagaggagcagctt
atgggtcacttgggtgtggttttatacgagtacctcggggaagaataccccgaggtgttg
ggttcaatcttaggagcgctcaaagccattgttaatgtcattggtatgactaagatgact
cctccaattaaagatctgcttcctaggttaactccaattctgaagaacagacatgaaaaa
gtgcaggaaaactgcatcgatctcgtgggtcgtattgcggatcgtggagcagaattcgtt
cctgcacgagaatggatgaggatatgcttcgaacttctggaaatgctcaaggctcacaag
aaaggtatcagaagagccactgtcaacacattcgggtacattgccaaagctatcggacct
caagatgtgttagccactctcctaaacaatctcaaggtacaagaacgtcagaaccgtgtc
tgtacaacagtagccattgcaatcgttgctgaaacgtgttcacctttcaccgttttaccc
gccctcatgaatgaataccgtgttccagaactcaacgtacagaacggtgttctgaaatct
ctctctttcctcttcgagtatatcggtgaaatggggaaggattatatctatgccgtgacc
cctcttctcgaagatgcacttatggacagggatcttgttcacagacaaactgcagcttct
gctgtgaaacacatggctcttggtgttgcaggtttaggttgtgaagatgcattggtgcac
cttatgaattatgtgtggcctaatatctttgaaacttcaccgcacgttattaacgctgtt
acggaagccattgaagggatgagagttgctcttggtgctgctgcagtactgaattactgt
ttacagggtttgtttcacccagcaaggaaagttagagaagtttactggaagatttacaat
tcgctttatattggtgcacaggatgctcttgttgctgcttatcccacattggaggatgaa
ggagagaatgtctatagtagacctgagttgttgatgtttgtgtaa

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