KEGG   Spinacia oleracea (spinach): 110783008
Entry
110783008         CDS       T05137                                 
Name
(RefSeq) COMPASS-like H3K4 histone methylase component WDR5B
  KO
K14963  COMPASS component SWD3
Organism
soe  Spinacia oleracea (spinach)
Pathway
soe03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:soe00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    110783008
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:soe03036]
    110783008
Chromosome and associated proteins [BR:soe03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    ATAC complex
     110783008
    NSL complex
     110783008
   HMT complexes
    COMPASS/SET1 complex
     110783008
    COMPASS/SET1 complex (yeast)
     110783008
    MLL-HCF complex
     110783008
    MLL3/MLL4 complex
     110783008
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     110783008
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML_2 WDR55 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_Aladin ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st NBCH_WD40 Beta-prop_TEP1_C CFAP251_N DSE1_N Beta-prop_SCAP PAC11 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_WDR41 Beta-prop_EIPR1 Beta-prop_WDR19_1st ASA1 Beta-prop_ACSF4 Beta-prop_SPT8 eIF2A WD40_RFWD3 Beta-prop_VPS8 TRM82_WD WD40_like Beta-prop_Vps41 Beta-prop_DCAF12 Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 Beta-prop_NOL10_N Beta-prop_WDR35_TULP_N KNTC1_N Beta-prop_HPS5 Beta-prop_NWD2_C Beta-prop_WDR75_2nd Ge1_WD40 Tricorn_2nd Beta-prop_IP5PC_F SHKBP1_KCTD3_C
Other DBs
NCBI-GeneID: 110783008
NCBI-ProteinID: XP_056684054
UniProt: A0A9R0I696
LinkDB
Position
5:complement(4165108..4168687)
AA seq 315 aa
MSAGQPQQPPPYQPYRLHKTLNTHKRAVSCVKFSNDGELFASASLDKTLALYSSQTLTLI
SLLVGHTEGISDLAWSSDSHYIVSASDDTTLRIWDARASSCDCVKTLRGHSGFVFCVNFN
HPSNLIVSGSFDETIRVWDVKTGRTVHVIRGHSLPVTSVSFNPDGSLIVSGSHDGSCKIW
DTATGVCLKVLIDDKIGVSFAKFSPNGKFILVATLDNTLRLSNYLTGKFLKMYQGHTNKV
YCITPTFSVTNGKYIVSGSEDHCIYLWDLQGRNLIQRIEGHIDTVVSVSCHPKRNMIASA
GLDKDRSVRIWVQNA
NT seq 948 nt   +upstreamnt  +downstreamnt
atgtccgccggacaaccccaacaaccaccgccatatcaaccgtatcgcctccacaaaacc
ctaaacacccacaagcgcgccgtctcctgcgtcaaattttccaacgacggcgaactcttc
gcctccgcctccctcgacaaaaccttagctctctactcctcccaaaccctaaccctgatc
tctctcctcgtcggccacactgaaggaatttccgaccttgcctggtcctcagactcacat
tacatcgtctctgcttcagacgacaccactctccgcatttgggacgcacgcgcctcctct
tgcgactgtgttaaaactcttagaggtcattccggtttcgttttctgcgtcaattttaat
catccttccaatttgattgtttctgggtcgtttgatgagacaattcgggtatgggatgtg
aaaacgggtcggactgttcatgtgattcgtggccattctttgccagtgacttctgttagc
tttaacccggatggatcgttgatcgtttcgggttcacatgatgggagttgcaagatttgg
gatactgctactggggtttgtttaaaggtgttgattgatgataaaattggggtttccttt
gctaagttttctccaaatgggaagtttattcttgttgccactctggataacaccttgagg
ctctccaactacttaacaggaaagttcttgaaaatgtaccaggggcataccaacaaagta
tattgtataaccccaactttctctgtaacaaatggaaagtatattgtaagtggatcagaa
gatcactgtatttacttgtgggatcttcaaggaaggaacttgatccaaagaatcgaaggc
catattgacactgtggtttcagtctcgtgccatccaaagcggaacatgattgcttcagct
ggcttggacaaagatagaagtgttcgaatttgggtccagaatgcatga

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