Spinacia oleracea (spinach): 110783168
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Entry
110783168 CDS
T05137
Name
(RefSeq) nuclear pore complex protein NUP98A isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110783168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110783168
03036 Chromosome and associated proteins [BR:
soe03036
]
110783168
Messenger RNA biogenesis [BR:
soe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110783168
Chromosome and associated proteins [BR:
soe03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110783168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
110783168
NCBI-ProteinID:
XP_021843173
UniProt:
A0A9R0JQS2
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Position
3:6389108..6405438
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AA seq
1006 aa
AA seq
DB search
MFGSSSPFGQSPSATFGAQSPFGQSNPTNNPFAPNPFGAANPFGSQTGGSMFGSTSTGVF
GQSSSPMSSTTVFGAASSPAFGSSNPAFGSSSSAFGGGSAFGQKPAFGGFGTGNQPSPFG
SSFQQSQPAFGSNAFGASSPFGASSQPAFGGTSSSAFGSSTTSTFGATSAPTFGAPSAPT
FGSTPTSAFGSTGAAFGVSSSPSFGSGGAFGSSSTPVFGAGGTSAFGTPTTQAFGAATTP
TFGATNSTPGFGATSTPSFNVANSSSPSFNFGSSPSFGQTTSTFGSTGFGSTPSTFGAST
SPFGASSSNTFGGGFGQSNLGGSRVANYTPTLEADAGSGNQAGKLESISAMAAYKDKSHE
ELRWEDYQRGDKGGPAPASQSTPGMNFGMSTPAPTPTPTPTPSSPFANPGFGQTQTSSNP
FSTPAQANPFSKPSVFGATTTSAFGSSPFGSNTTSFGSAPASTPSLFGSSTPGFGSGTTP
SLFSGMSSTIGSTTTFGSTPSQGPSTGFGSTFGNSQPSLFQQPSSTLGSGTTFGQTSSSI
GQSPNFGQNMFNNTSPSPFGSNLFSSTTGNQNQYQFPQSTPSLSTPFQSSLPTQTNSTFS
TFGQTPLGGSSGFAGSGMFSQGPGLPSANQISAVAQPVAVTNPFGTLPAMPHMSIGNTGA
SPSIQYGISSMPVVDKPTPVRISSFLTSRHLSQRRIRLPARKYHPKNDGSRVPFFSDDDE
APSTPKADALFVPRENPRALIIRPIDQWPKSSMKEACVLVHENGNTLKENEHPQNGSLAE
GNGRISNGNGLINERSHPVRTSQKPGAMSDDTSNHKGNSYITLSGHRAGEAAIVYEHGAD
IEAMMPKLRHSDYYTEPRIQELAAKERAEPGFCRHVKDFVVGRHNYGSIKFLGETDVRRL
DLETLMQFNNREVIVYMDDSKKPPVGQGLNKAAEVTLLNIKCFDKKTGNQILEGPRIEKY
KEMLKKKAEDQGAEFLSYDPIKGEWKFRVSHFSKYVLYDDDQWDIA
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttcaagtagcccttttgggcaatcacctagtgcaacctttggagcccagtca
ccttttggacaaagcaatccaaccaataatccttttgctccaaatccttttggtgcagct
aatccttttggttcacagacaggaggttcaatgtttggcagcacctcaactggcgttttt
ggtcagtcatcatcaccaatgtcttcaacaacggtgtttggtgctgcttcatcaccagcg
ttcgggagttccaatcctgcttttggaagctcatcatccgcctttggagggggatctgca
tttgggcagaagcctgcttttggaggatttggtactggtaaccaaccaagtccatttgga
agctcatttcaacaatcacagcctgcgtttggcagcaatgcatttggtgcttcttcacca
tttggtgcatcaagccaacctgcatttggtggtactagctcctcagcttttggatcatca
actacgtcaacatttggcgccacaagcgcccctacttttggagctcccagcgctcctacc
tttggttcaacacctacttcagctttcggaagcacgggagctgcctttggtgtgtcaagt
tccccttcttttgggtcaggaggagcatttggatcttcaagcacccctgtctttggtgct
ggaggcacctctgcatttggcaccccgaccactcaagcgtttggtgctgctaccactcca
acctttggagctactaatagcactccaggttttggggctactagcactccgtcattcaat
gtagcaaattctagttctccatcttttaattttggctctagcccatcctttggtcaaact
acatctacttttggaagcaccggttttgggtctacaccatctacttttggtgcctcaact
tctccatttggagcgtcaagttccaatacttttggcggcggctttgggcagtcaaatttg
ggaggaagtagagttgctaattacacaccgactttagaagcggatgcaggttctggtaac
caagctgggaagttggaatcaatatctgctatggcagcttacaaagacaaaagtcatgaa
gagctgagatgggaggattaccagcgtggtgataaaggcggccctgctcctgccagtcaa
tctactccggggatgaattttggcatgtctactccagcaccaacgccaacaccaacacca
acaccgtcaagcccctttgcaaacccagggttcggacagacacagacgtcatcaaaccca
ttttcaacacctgcgcaagcaaatccattttcaaaaccttctgtttttggagctacaact
acctctgcatttggttcatcgccttttggttctaatacaacctcttttgggtcagctcca
gcttcaacaccttcattgtttggatcatctactccaggatttggttcaggcactactcct
tctctttttagtggaatgtcttccactattggatctacaactacatttggttctacgcct
tctcaaggacctagtacaggatttggttccacttttgggaattctcagccatccttgttt
cagcagccctcatccacacttggatcaggaactacttttgggcaaactagttcttctatt
ggacagagtcctaactttggacaaaatatgtttaataatacttcaccatctccctttggg
tcaaatttattttcaagcaccacaggcaaccaaaaccagtaccaatttcctcaaagcact
ccctctctttcaactccttttcaatccagtcttcccacacagacaaacagtactttcagc
acctttggacagacaccattaggtgggagcagtggctttgctggatctggcatgttttca
cagggtcctggactgccttctgcaaatcagatatctgcagttgcacaaccagttgcagtc
acaaatccttttgggacccttccagcaatgcctcatatgtcaattggcaatactggagcc
tcaccatcaattcaatatgggatatctagcatgcctgttgtcgataaacccacccctgtc
agaatatcatcctttttaacatcaaggcatttgtctcagaggcggatcaggctacccgca
aggaaatatcatcccaagaatgatggttcaagggttccttttttcagtgatgatgatgaa
gcacctagcactccaaaggcagatgctctatttgttcccagggaaaatccaagagctttg
ataatccggccgattgatcagtggccgaaatcttcaatgaaggaagcatgcgtcttggtg
catgaaaatggtaatacactcaaagagaatgagcatcctcagaacggatcccttgctgaa
ggaaatggtagaatttccaatggaaatgggttgatcaacgaacgaagtcatcctgttaga
accagccagaaacctggtgccatgtctgatgatacttcaaaccataaaggaaattcatac
attacactttcaggtcacagagctggtgaggcggctatagtgtatgagcatggggctgat
attgaggcaatgatgcctaaacttcgacactccgattattacacggagccccgtatccaa
gagctggctgctaaagaaagggctgaaccgggattctgcagacacgtcaaggattttgtt
gtgggacgacataattatggaagcattaaatttctgggggagactgatgtaagacggctt
gatcttgagacacttatgcagttcaacaatcgagaggtaattgtctacatggacgacagc
aagaaacctcccgtaggtcaaggtctcaacaaggctgctgaggtaacccttcttaacatc
aagtgctttgataaaaagactggtaatcagattttagaaggaccgagaattgagaaatac
aaggagatgctcaagaagaaagcggaggatcaaggtgctgagtttttgtcctacgatcct
ataaaaggagagtggaaatttagggtcagtcattttagcaaatatgtgctttatgatgat
gaccaatgggacattgcttga
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