Spinacia oleracea (spinach): 110783225
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Entry
110783225 CDS
T05137
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soe03021
]
110783225
Transcription machinery [BR:
soe03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
110783225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
VMAP-M20
Motif
Other DBs
NCBI-GeneID:
110783225
NCBI-ProteinID:
XP_021843226
UniProt:
A0A9R0I5T3
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Position
3:complement(61989085..62027088)
Genome browser
AA seq
1601 aa
AA seq
DB search
MEQIQRPSSSRSYQLHPAKPIIIDLFNLYLGRSSRQKSDEQPPNKAQKRVTALNRDLPPP
NERFVSDFEQVLRQFPDQEQLRLVTESVLISLVIQCSSHSPRAEFLLFALRSLCSIEHIN
WDTFVPSLLSAVSSAELSFGQGSQATPAVTSANVSQPGMPPSTNTISISSTFQSNPASPL
ISAQGIGSPAQSANEPSSALTSSPLKLNEISSNLQQSPLLVSSAIRDSAISSLRQLCCKI
ILISLDSTLKPATHAEILCHMQAWLVSWDQRHQASDDSDITKSWRPDKALIDWLHSCLDV
VWLLVKEDKCRVPFYELLRSGLQFIENIPDDESLFTLIMEIHRRRDMMAMHMQMLDHHLH
CPTFGTQRFLPLATPHFGGEVITNLRYSPITYPSVLGEPLHGEDLAVCIQKGTLDWDRAL
RCIRHALRTTPSPDWWKRVLLVAPCYRPHPNVSSSPGAVFTWDMICEATIDRIVELLKLT
NSESNCWQEWLIFSDIFFFLMKSGCIDFVDFVDKLVLRLIEDDYHILRTNHVTWLLAQII
RVELVMNALNNDSRKVETTKKILSFHREDKSSDPNSPQSILLDFISSCQNLRIWSLNTLT
RDHLNNEQLQKGKQIDEWWRQVSKGERMLDYMNMDERSIGMFWVVSYTMAQPACEMVMGW
LTSAGTEVLPVSGIQSNERLVMMRETSPLPISLLSGFSINLCMKLAYQMEDSLFSGQVIP
SIGMVETYTRLLLIAPYSLFRSHFSHLTQRNPSTLSKPLATLLVLEILNYRLLPLYRYEG
KNKSLMYDVTKIVAALKGKRGDHRLFRLAENLCLNLILSLRDFFSVKKEGKGPTEFTETL
NRIAITSLAIIIKTRGIAESEHLLYLPAMVEQILSSSQHTWSDKTLRYFPPVLRDTLVGR
ADKRGLAVQAWQQAETTVINQCTQLLSPSADPTYVVTYISHSFPQHRQYLCAGAWILMHG
HPESINSANLARVLREFSPEEVTANIYTMVDVLLHHIHVEIQRGHPLQDLLLKASSNLAF
FIWTHELLPLDILILALIDRDDDAHALHIVISLLDRQELQQRLKLFYLTRGPPEHWLYSG
MFKRVDLQKALGHHLSWKERFPVIFDDIAARLLPVIPLVVYRLIENDAMDHAERVLVMYK
QLLAYHPLRFTFVRDILAYFYGHLPGKLIVRILNVLDISKIPFSESFPQHIALSNSSACP
PPDYFASLLLGLVNNVIPPLGSSSKSGSILDASYLSSRCPPNKTSITNQSGQTNVSEVQK
AFYQIQDPGTYTQLVLETAVMELLSLPVSASQIVASLVQIVVHIQSTLIQSSNGLHGTSN
SSGQTSVLPTSPSGGSTDSMNASRSAPPVSGLNTSNFVSRSGYTCQQLSCLLIQACGLLL
AQLPQDFHIQLYLEVSRLVKETWWLTDGKRSPSELDSAVNYALLDPTWAAQDNTSTAIGN
VVGLLHSFFSNLPQEWLEGAHVIIKQLRPITSVAMLRIVFRIMGPLLPRLANAHTLFNKT
LSLLLGSMVDVFGKTAQPSVPAQASEIIDLIDFLHHVVHYEGQVGPVQSTSKPRAEVLVL
FSRALESLRPDAQHLLSHLTTDVNSSVYASTHPKLVQNPMS
NT seq
4806 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaattcaaaggccatcttcttcaagatcttaccaattacaccctgctaaaccc
attatcatcgatctcttcaacctttatttagggagaagttcgcgccaaaaatctgatgaa
caaccaccgaacaaggcacaaaagcgtgtaacagcactcaatagagaccttcctcctcca
aatgagcgatttgtttcagactttgaacaagttctgaggcaatttcctgatcaagagcaa
ttacgtttggtaacagaatctgttctaatttctctagttattcagtgcagtagccattca
ccacgagcagaatttcttctgttcgctctgagaagcttgtgcagtatcgagcatataaat
tgggatacttttgtaccatcccttctcagtgcagtgtcctctgcggagttgtcatttggt
caaggtagtcaagctacacctgctgtcacttcagcgaatgtatctcaacctgggatgccg
ccatccacaaatacaatatcaatatcctctacttttcagtctaatcctgcatccccatta
atctcagctcagggtataggatcccctgctcagtctgctaatgaaccatcatctgctcta
acatcatctccactaaaactgaatgagatttctagcaaccttcaacagtcaccattgttg
gttagttcagctataagggatagtgccataagcagtctgcgtcagctctgctgtaaaatt
attctaatcagtctagattctactttgaaacctgccacacatgctgaaatattatgtcac
atgcaagcttggctggtcagttgggatcaaagacatcaagccagtgatgattctgatatc
acaaaatcttggagacctgacaaggctctcattgattggcttcatagttgtttggatgtt
gtgtggttgttagtcaaggaggacaaatgtcgggtaccattttatgagttactgcgcagc
ggattacagtttattgaaaacataccagatgatgaatccttgtttacacttattatggag
attcaccgacgacgggacatgatggctatgcatatgcaaatgttagaccaccacctacac
tgtcctacttttggtacccaacgatttttacctctagcaactcctcatttcggaggcgag
gtgataacaaatttgcgctattcacccatcacatatccaagtgttttgggggagccactg
catggagaggatctggcagtttgtatccaaaaaggtactttagactgggatagagctttg
cggtgtatccgacatgctctgcgcacaactccctctccagactggtggaagcgtgtgctg
cttgtcgcgccctgttaccggccacatccaaatgtatcctcctctcctggagccgttttc
acatgggatatgatttgtgaggcaacaattgacagaattgttgaacttttgaagctgaca
aattcagagtcaaattgttggcaggagtggcttatcttttcagacatattcttctttctg
atgaagagcggttgcattgactttgtagattttgtggacaagcttgttttgcgcctcatt
gaagatgactaccatattcttcggacaaatcatgttacatggttgcttgcacaaataatt
cgtgttgagcttgttatgaacgctctaaataatgattccagaaaggttgaaacaacaaaa
aagatcttgtcatttcatagagaagataagagttctgacccgaacagcccacagagtata
ctgcttgactttatcagcagttgccagaacttgaggatctggtctttgaacacgctaact
agagatcacttgaataatgagcagcttcagaaaggaaagcaaatagatgagtggtggagg
caagtgagcaaaggtgaacggatgctcgattacatgaatatggatgaaagatcaattgga
atgttttgggttgtatcttacacaatggcacagcctgcttgtgagatggtgatgggttgg
cttacttctgctggtacagaagtactgccagtctctggtatacagtcaaatgagagacta
gtaatgatgcgggaaacaagtcctctgccaatttcactattatctggattctcaatcaat
ttgtgcatgaaacttgcatatcaaatggaggattccttgttttctggacaggtcattcct
agcatcggaatggttgaaacctatacaaggttgcttctcatcgcgccatattcattgttt
cgctcacatttcagtcatctgactcaaaggaatccaagcacgttaagcaagccacttgcg
acacttttggttctagagattctgaattatcggttgctcccactctatcggtatgaagga
aagaacaaaagcttaatgtatgatgtcacaaaaattgttgctgccttgaaagggaaacgt
ggggatcatcgcttatttagactggctgaaaacctgtgcttgaacctgatcttgtccctg
agagacttcttttcagtgaagaaggaaggaaagggtcctactgaattcactgaaactttg
aatcgaattgctatcacttctctcgctattataattaagacccgtggaatagctgaatct
gaacacttgctttatcttcctgcaatggtggagcaaatattgtcgagtagtcaacatact
tggtctgacaaaactctacgttatttccctcccgttctgcgtgacacgctagttggccgt
gcagataaaagggggctggccgttcaagcatggcagcaggcggagactactgttatcaat
caatgcacccagcttctttcaccgtcagccgatcctacttatgtagtgacatacatcagt
catagctttcctcaacacaggcaatatctttgtgctggtgcttggatactaatgcatgga
caccctgaaagtataaatagtgcaaacctggcacgtgtgttgagagaattttctcctgaa
gaagtgactgcaaacatttacacaatggttgatgttctgcttcatcacattcatgtagaa
attcagcgtggacatcccttgcaggaccttcttttgaaagcatcttcaaatttggcattt
tttatttggactcatgagttgcttcctttggatattttaatccttgcattaattgaccgt
gacgatgatgcacatgctttacacattgtgatcagtctgctcgatagacaagaacttcag
caaagattgaaattattctatttgacccgtggtccccctgagcattggctatactccgga
atgttcaaacgtgtagatctgcaaaaggcattaggacatcatctctcttggaaggaaagg
tttcctgttatttttgatgacattgctgcccgtttgctgcctgtcattcctttggttgtt
tatcgactcattgaaaatgacgctatggaccatgctgagagagttctggtgatgtataag
caattgctagcctaccatcctttgaggtttacttttgtccgtgacatactagcatatttt
tatggccatcttccaggaaagctaatcgttcgcatactgaatgtgcttgatatttccaag
attccattttcagagtcatttccacagcacattgccttgtcaaattcatcagcatgccct
cctccggattactttgcttccctgctgttgggtctggtgaataatgtcattcctcccctt
ggtagcagctcaaaatcaggatcaatcttagatgcttcatacctttcgtctcgctgtccg
ccaaacaaaacttctataacaaatcaatctgggcaaacaaatgtttctgaggttcagaaa
gcgttctatcagatccaagatcctgggacatacactcagctggtgcttgaaacagctgta
atggaattgctttctcttccagtttctgcatcccaaattgtggcgtcacttgtacaaatt
gttgtccatatccaatcaacactaattcagtccagcaatgggttgcatggaacttcaaat
agttcgggacaaacctctgttttgccaacatccccttctggtggaagcacagactctatg
aatgcaagcagatctgccccgccagtttctggactaaatacgtccaactttgtttctcgt
agtggctatacatgtcaacagttatcttgcttgctgatccaagcttgtggtctcttactg
gctcagcttccacaggatttccacatacaactctatcttgaggtatcacgtcttgttaaa
gagacctggtggctcactgatgggaaaaggtcccctagtgagctggattcagctgttaat
tatgctttactagatccgacatgggctgctcaagataatacctccacggcaataggaaat
gttgtcggtttgctccattcattctttagcaatcttccacaagaatggcttgaaggggca
catgtaatcattaagcaactcaggccaattacttcagtggctatgctgaggattgttttc
cgtataatgggtccattgctcccaagacttgcgaatgctcatacactctttaacaagact
ctgtctctactacttggttcaatggtggatgtctttgggaagaccgcacaaccatctgtg
cctgctcaggcatcggagataattgacttgattgacttcctgcaccatgttgtgcattat
gaagggcaggttgggccagtgcagtctacaagtaaacctagagcagaggttttggtactg
tttagtagagcattagaaagtttgcgaccagatgcacaacatcttctatctcacctaaca
actgatgtaaattcttccgtctatgcttctactcatccaaagcttgtccagaatcctatg
tcctaa
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integrated database retrieval system
