Spinacia oleracea (spinach): 110783227
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Entry
110783227 CDS
T05137
Name
(RefSeq) U3 small nucleolar RNA-associated protein 21 homolog
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110783227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
soe03009
]
110783227
Ribosome biogenesis [BR:
soe03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
110783227
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR5
Utp21
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
WD40_MABP1-WDR62_2nd
ASA1
Beta-prop_EML
Beta-prop_WDR75_1st
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_VPS8
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_HPS5
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_WDR41
Beta-prop_NOL10_N
Beta-prop_WDR19_1st
PAC11
Beta-prop_EIPR1
Beta-prop_SPT8
DSE1_N
CFAP251_N
Beta-prop_ACSF4
NBCH_WD40
TRM82_WD
WD40_like
WD40_RFWD3
TAF1C_beta-prop
Beta-prop_SCAP
VID27
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
110783227
NCBI-ProteinID:
XP_021843230
UniProt:
A0A9R0I6P9
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All DBs
Position
3:complement(61449959..61479511)
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AA seq
906 aa
AA seq
DB search
MGIFEPFRAIGYITSSVPFSVQRLGTETFVTVSVGKAWQIYNCAKLNLVLVGPQLPKKIR
ALASYRDYTFAAYGNKIAVFKRACQVATWSSHSAKVNLLYLFGDHIVSVDVDRHLFIWAF
KGIEQNLEPISHIVMGDNFSPTCIAHPDTYLNKVIFGSQEGTLQIWNVNTKKKIYDFRGW
KSPISCCVSSPALDVVAIGCTDGKIYVHNICYDEEIVTFTHSMRGAVTALSFSTDGQPLL
ASGGTSGVISIWNLEKRRLQSVIKEAHDAAIISLHFFANEPVLMSASADNSIKMWIFDTS
DGSPRLLRFRNGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVVQDQQSRELSQRHVSRR
AKKLRIKEEEIKLKPVVAFDCAEIRERDWCNVVTCHMDTTEAYVWRLQNFVLGEHILNPS
EENRTPVKACTISACGNFAVLGTSGGWIERFNLQSGMSRGSYLDKSERRSCGHDGEVVGV
ACDSTNTLMISAGYHGDIKVWNFRGRELNSRWEVGCSVVKIVYHRPNGLLATVSDDLVIR
IYDVVALRMVRKFEGHNDRVTDLCFSEDGKWLLSSSMDGTLRIWDVILARQIDAVQVDVA
ITALSLSPNMDVLATTHVDQNGVYLWVNQAMFTGSSSIDSYASGKEILHVNLPSISAAEG
NKMTNVEKIKTDCSHVRETAITKFDQKMPDLITLSLLPKTQWQSLINLDIIKVRNKPIEP
PKKPEKAPFFLPSIPSLSGDIMFKPSEVANEDLKEGDVEQNVDYMIGLPSSPFVQVLQSA
VESKNFSAFTDYIKGLSPSSLDMELRMLQIIDDDELSETNKRPELLSLDMLLDYFIHEIS
CRNNFEFVQAVVRLFLKIHGETMRCQSQLQQKAGNLLETQCAVWQRVDELFQSARCMIAF
LSNSQF
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggggattttcgagcccttcagagcaattggctacattactagctcagtccctttctct
gttcaaagattaggtactgaaactttcgtcactgttagcgtcggaaaagcttggcaaatc
tacaactgtgcgaagcttaatttggtgctcgtcggtccccaacttccgaagaaaattcgg
gctcttgcttcctaccgtgattatacctttgcagcttatgggaacaaaatcgcagtgttc
aagcgcgcttgtcaggttgcaacttggagctctcatagtgcgaaggtcaatttattgtat
ctatttggtgatcacatcgtgagtgttgatgttgatcgtcatttgtttatatgggcattt
aaaggaattgagcagaatttagagccaattagccatattgttatgggagacaatttttct
cctacatgcattgcacatccagatacttacttgaacaaggttatttttggtagccaagaa
ggcaccttgcagatttggaatgttaatacaaagaaaaaaatttatgattttaggggatgg
aaatcgccaatttcttgttgtgtctcatctccagcactagatgtggtagccattggttgc
actgatgggaagatctatgtccataatatatgctatgatgaagagatcgtcacatttacg
cattctatgcgaggtgctgtgactgcactatcttttagcacagatggacaacctttgtta
gcatctggaggaacatctggtgttattagcatatggaatcttgagaaaagaaggctccag
tcagtcataaaagaggctcatgatgctgcaattatttcactccacttctttgcaaacgag
cctgtgctgatgagtgcttcagcagacaactctataaaaatgtggatattcgacaccagt
gatggaagtcctcgtctattgcggttccgaaatggtcatagtgcacctccactttgtata
aggttttatgcaaacgggagacacattttatctgctggccaggaccgcgcgttcaggctt
ttttctgttgtccaggatcaacaaagcagggagctttcacagcgtcatgtgtcaagaaga
gccaagaaactcaggataaaggaggaagaaataaagctgaagcctgttgttgcatttgat
tgcgctgaaataagggagcgtgattggtgcaatgtggttacttgtcacatggacactact
gaggcatatgtgtggagactgcagaactttgtgctcggagagcacatactgaatccttca
gaagagaatcggactcccgttaaggcttgcaccatcagtgcatgtggaaactttgctgtt
ttggggacatcaggtggttggattgagcggtttaatctccaatccgggatgagccgaggt
agttacttggataagtccgaaaggaggagctgtggccacgatggagaagttgttggagtg
gcatgtgattcaacgaataccctgatgataagtgcaggatatcatggtgatataaaggta
tggaatttcaggggacgtgagctaaactccagatgggaagtgggctgttctgtggttaag
atagtgtaccataggccaaatgggttgttagctactgtttctgatgatttagtcatccgt
atatatgatgttgtggcacttaggatggtccggaaatttgaaggccataatgaccgtgtt
actgatttgtgctttagtgaggatgggaaatggcttttgtcgtctagcatggatgggacc
cttcgaatttgggatgttattttagccagacaaatagacgccgtccaggttgatgtggct
atcactgcactgtctttgtcacccaatatggacgttctagcaactactcatgtcgatcaa
aatggagtctacctatgggttaatcaagcgatgttcacaggttcatctagtattgattct
tatgcaagcgggaaggagattctgcatgtcaatttgccatctattagtgctgcagagggc
aataaaatgaccaatgttgagaaaatcaaaactgactgttcacatgttagagagactgcc
ataacaaaatttgaccagaaaatgcctgatttgattactctttcactcttgcccaagacc
cagtggcaaagcctgatcaatctggacataattaaggttcgaaataaacccattgagcct
cctaagaagcctgaaaaagcaccgttctttttaccttcaattccgtctctttcaggagac
ataatgtttaagccaagtgaggtggccaatgaagatttaaaagagggagatgttgaacaa
aatgttgattacatgattggtttaccttcatctccatttgtgcaagttctccaatctgca
gtagaatccaaaaatttttcagcattcactgattatattaaaggtttgtcaccgtcttct
ttggatatggagcttcggatgcttcaaattatagatgatgatgagttatcagagaccaat
aaaagacctgagttgctctcacttgacatgcttttggattacttcattcatgaaatttct
tgcagaaacaattttgagtttgtgcaggctgttgtgagactattcctaaagattcatggg
gaaacaatgagatgtcaatcgcaactgcaacagaaggcaggaaatctgttagaaacgcaa
tgtgcagtgtggcaacgagtggatgaattgtttcagagtgctcgatgtatgattgctttc
cttagcaattcacagttttga
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