Spinacia oleracea (spinach): 110783307
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Entry
110783307 CDS
T05137
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soe03000
]
110783307
03036 Chromosome and associated proteins [BR:
soe03036
]
110783307
Transcription factors [BR:
soe03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
110783307
Chromosome and associated proteins [BR:
soe03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
110783307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
MlaC
CDC45
Motif
Other DBs
NCBI-GeneID:
110783307
NCBI-ProteinID:
XP_056684721
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All DBs
Position
5:3804200..3813086
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AA seq
637 aa
AA seq
DB search
MADHLFNSISLGGRGGTKPGQMRINSGGILWKKQGGGKAVEVDKSNISVLFWMKVQRSTQ
LGVRSKDGLYYKFIGFRDTDVATLTTFFRSSFGITPEERQVSVSGHNWGEVDFNGNMLTF
LDGSKQAFELSLTDVSQTQMQGKTDAILEFHLDDAAVANEKDTLMEISFHIPNSNTQFVG
DENRPSAQVFHDKIMSMADVDAEEAVVTFDGIAILTPRGRYSVELHLSFLRLQGQANDFK
IQYSSVVRLFCLPKSNQPHTFVVITLDPPIRKGQTLYPHIVMQFETDYVVESTLSMNEDL
LNTKYKDKLESSYKGLIHDVFTNILRALSSAKVTRPGKFRSCQDGYAVKASLKAEDGILY
PLEKSFFFLPKPPTLILHEEIDFMEFQRHVVAGSNMHYFDLLVKLKTDQEHLFRNIQRSE
YQNLFDFISAKGLKIVNVGEGANLPSISIAPLSSDDEVVDPHLRRIRDAQDESDEEDEDF
VIDKDDGGSPTDDSEEDHSDGSVSGDEKEKPAKKEKKDSASLKPSSSKKKSRDGDEDGSK
KRKTKRKKDPNAPKKAKTGFIFFSQAERENTKKENPGIAFLEMGKALGEKWRKMSAEEKE
PFEAQARADKKRYSEEIGDYKNPQSVNVDSGNDSESE
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccacctcttcaacagcatctccctcggcggtcgtggcggcacgaagccaggg
cagatgagaatcaattcaggcgggatcctgtggaaaaagcagggaggtggaaaagctgtt
gaagttgataagagtaatatctctgtgttattctggatgaaggtgcaaaggtccactcaa
cttggagttcgaagcaaagatggattgtactataagtttataggtttccgggatacggat
gttgccactctgaccactttcttccgaagcagctttggaataaccccagaagagagacaa
gtgtcagtcagtgggcataattggggagaagttgacttcaatgggaatatgttgactttt
ctcgatggctcaaaacaagcatttgagctatctttaactgatgtctcacaaacacagatg
caaggaaaaactgatgctatattggagttccatttggatgatgcagctgttgccaatgag
aaagatacacttatggagataagtttccacataccgaattcgaacacccagtttgttggt
gatgaaaatcgcccttcagcacaagtgttccatgataagatcatgtctatggctgatgta
gatgcagaagaagctgttgtcacattcgacggtattgctattcttactccaaggggtcgg
tatagcgttgaactgcatctttcattcttacgtctccaaggacaagctaatgattttaaa
atccagtatagcagcgttgttcgactattctgtcttcccaagtcaaaccaaccacataca
tttgttgttatcactcttgatcctccaattcgtaaagggcaaacgttgtaccctcatatc
gtaatgcagtttgagaccgactatgttgttgaaagcactctttccatgaatgaagacctc
ttgaataccaagtacaaggataagttggaatcttcgtacaagggtctcattcatgatgtg
tttacaaacatattgcgtgccttatctagcgccaaggtcaccaggcctgggaaattccgc
agctgccaagatggctatgctgtcaaggcatcacttaaagctgaagacggaattctatac
ccacttgaaaagagtttcttcttcttacccaaacctccaacccttattcttcacgaggag
attgattttatggagttccaaaggcacgttgttgcggggtccaatatgcattactttgat
cttcttgtaaaactgaagacagatcaggaacatctcttccgaaatatccagaggagtgaa
taccagaacttgtttgatttcatcagtgctaagggcttgaaaatcgtgaatgtcggagaa
ggtgctaatctaccttcaatctccattgcacctctaagtagtgatgatgaagttgtggac
ccacatttgagaagaatcagggatgcacaagatgaaagtgatgaagaggatgaagatttt
gttatagacaaggacgatggagggtctcctactgatgactctgaagaagatcattcagat
ggtagtgttagtggcgatgagaaagagaagcctgctaagaaagaaaagaaagactcggca
tcattaaaaccttcttcaagcaagaagaaatctagagacggggatgaagacggatcgaag
aagaggaaaacgaagaggaaaaaggatccaaatgctcctaaaaaggcaaaaaccggtttt
atattcttctctcaagctgagcgggagaacacaaagaaagaaaatccagggattgcattc
ttagaaatggggaaggctcttggagagaaatggaggaaaatgtcagccgaggaaaaagaa
ccctttgaagcacaagctcgcgctgacaagaaacggtacagtgaagaaattggtgattac
aagaatccgcaatctgtaaatgtggattcggggaatgattctgaaagcgaatga
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