Spinacia oleracea (spinach): 110783308
Help
Entry
110783308 CDS
T05137
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110783308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soe03021
]
110783308
03036 Chromosome and associated proteins [BR:
soe03036
]
110783308
Transcription machinery [BR:
soe03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110783308
Chromosome and associated proteins [BR:
soe03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110783308
PBAF complex
110783308
GBAF(ncBAF) complex
110783308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
110783308
NCBI-ProteinID:
XP_021843325
UniProt:
A0A9R0JQG1
LinkDB
All DBs
Position
4:complement(2671704..2674718)
Genome browser
AA seq
560 aa
AA seq
DB search
MSANPNNNQPKNIGRPMSSPFGNTGMVNPNLPPNYNPSSSSSSQPQPQPQNQPHQLGFGF
QNQFQLAQAQAHALAQAQSKAAAAAHAHLLQAQGMSMNQSQAMGMMGNLGGGGGGSSPSM
SGAGNLSGVKRVPQKPPVRPPGPTGGGGINMMSPPMKNMMELTPASAARRKKQKPQEKHL
SERIAPILPESALYTQLLEFESRVDAALMRKKVDIQEALKNPPSVQKTLRIYVFNTFANQ
NQSQSMPKKDPPTWTLKVIGRILEDGIDPEQLATMKPNPMYPKFSNFFKRVTIALDQRLY
PENHLIVWENSRSSAPTEGFEVKRKGDKEFTVNIRFDMNYLPEKFKLSPPLTELLGIEAE
TRPRIIAAIWHYVKARKLQNPNDPSLFNCDPQLQKVFGEEKMKFTMVSQKISQHLTPPPP
IQVEHPIKLSGISPSGNACYDVLVDIPFPIQRELSMLLANTEKTKEIEACDEGICAAIRK
IHEHRRRRAFFLGFSQSPVEFINALIESQSRDLKVVSGEASRNAERERRSDFFNQPWVED
AVIRYLTRKPANAPDGPGST
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaaatccgaacaataatcaacccaagaacattgggagaccaatgtcatcccca
tttggaaatactgggatggtaaaccctaatttgccccctaattacaacccatcgtcatca
tcatcttcccaacctcaaccccaaccccaaaatcaacctcatcaattagggtttgggttt
cagaatcagttccaattagcccaagcccaagcccatgccctagctcaagcgcagtcgaaa
gctgctgctgctgcacatgctcatcttttacaagctcagggtatgtccatgaatcagtca
caagctatggggatgatgggtaatttgggtggtggtggtggtggttcatcaccttcaatg
tcaggtgctgggaatttgagtggtgttaagagggtcccacagaaaccccccgttcggccc
ccgggacccacgggtggtggtggtattaacatgatgtccccacctatgaagaacatgatg
gagcttacaccggcttccgctgctaggaggaagaagcagaaaccgcaagaaaagcatttg
agtgagagaattgctcctatattgcctgaatctgctttgtatactcaacttctcgagttt
gaatcccgtgttgatgctgcgttgatgaggaagaaggttgatattcaagaggctttgaaa
aacccgccttctgttcagaaaactcttcggatttacgtgtttaacacttttgcaaatcaa
aatcagagtcagtctatgccgaagaaggacccacctacttggactttaaaggtaataggg
aggatattggaggacgggattgatcccgaacagcttgctaccatgaaaccaaacccgatg
tacccaaagttctctaattttttcaaaagggttaccattgcattagatcagaggttgtac
cctgaaaaccatttaatagtatgggaaaattcccggtcatctgcaccgacagagggtttt
gaggtgaaaaggaaaggggataaagaatttacagtgaatattcggtttgacatgaactat
ttacctgagaaattcaaactttcaccacctttgactgaacttctgggtatagaagctgaa
actcgcccgagaattatagcagcaatctggcactatgttaaagcaagaaagttgcagaac
ccaaatgacccatccttgtttaattgtgacccgcaacttcaaaaggtatttggagaagaa
aagatgaaattcaccatggtttctcagaagatatcacagcatttgaccccaccaccaccg
atacaggtggaacatccaatcaagctttcgggaatttccccttctggaaatgcttgttat
gatgtattggtggatatacctttcccgatacagagagagctatccatgttgctggcaaac
accgagaaaactaaggagattgaggcttgtgatgagggaatttgtgctgctataaggaag
attcatgagcaccgtagaaggagagcgttctttctagggtttagtcagtcacccgtggaa
ttcattaatgcgttgatagaatcgcaaagcagagatctcaaggttgtttctggagaagct
agtcgtaatgcagaacgagaacgtagatcagattttttcaaccaaccatgggttgaggat
gccgttattcgctacttaactcgcaaaccagccaatgcacctgatggtcctggaagcaca
taa
DBGET
integrated database retrieval system
