Spinacia oleracea (spinach): 110783964
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Entry
110783964 CDS
T05137
Name
(RefSeq) nuclear pore complex protein NUP160 isoform X1
KO
K14303
nuclear pore complex protein Nup160
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110783964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110783964
03036 Chromosome and associated proteins [BR:
soe03036
]
110783964
Messenger RNA biogenesis [BR:
soe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110783964
Chromosome and associated proteins [BR:
soe03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110783964
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP160_helical_2
Beta-prop_Nup120_160
TPR_NUP160_120_M
HEAT_Nup120
TPR_Nup160_C
NUP160_helical
Motif
Other DBs
NCBI-GeneID:
110783964
NCBI-ProteinID:
XP_021844063
UniProt:
A0A9R0I7H6
LinkDB
All DBs
Position
1:complement(117613099..117638452)
Genome browser
AA seq
1493 aa
AA seq
DB search
MGRYSKVGMEVPFIGSDSIKWVEASVADTHASSSGSRPITPPTEDCASCSVIGTPPTYLI
WRICRRLPHAIEILELNADKDIPRVGLRISFPEALSSFAYICKNEINSAYGNVYLLYVLS
VSGIAYLLRLKNVSAYSASFIFSSNEILHFDTNISPDCLPITAVAATTGCFIIGRDDGSV
TCFKLGVLDENAPGFMYELRDEAALSRLWGLMSRSRLAGSVRDLVVSDIHGRKIVFVLHS
DGSLRVWDLLRHGKLFSQSLSSPGTAFSRLWVGPVDVDAHAIPLAIMYTQSMGVNMQGLG
ICNLNFSSGEKYILSLGSSMQYIPLTQGKVTDVKFSSNKIWVLTEDGLLEHDLLSLNVDT
EKGHSYSLQEAFIAEQLFQSSEHSLDYLYQTTCSIFSSSKVQIIGFVSSIFLRRLLHPGV
YSSSVLRLTLEDYDKRWTDNEFQALTIDELSREILLLIEHEAINGSSFSAFKCWKEFCLR
YFDRWRKRNTPFNLLVDSTSGAVGLIRENAVSMFRSLEDIELFAYGAFEELEDFPKFGVD
VSSSGLEREILFEVLRCSRLLGRRLGPVISPIVYESVVGVSVTSTEDIVPRLLNTVKCGY
NASVAASNVSDLGADFIWKKELLEHKTLRKFTMDTLISIHGLCEKASGWVRVLNVIESYL
NLLVPRKPTMSSDVSNVTLNANISIIVQATSQVAELMFESALNVLLFLSYILDISGQVHM
LPDDMSRIQLELIPMVHEIIAEWLIIHFLATMPSESHSAEDFSSQLSSLKIDSDSGKGSW
IAKLGSVDFTLAFILVLDAQGSSEGWSNQSLSCLPKPQNFINLVSHFSSWLVWGMSREAP
LYIFGHSTEIALSLLRHGQYNAVQNLLMIVDAHLRNEKSSISIQNSDGQWCVLHHLRGCS
LLAQAQSGLCRTSKEKKVSEAMRCFFRASSGEGAAQALQKLSDEAGLSHLGIPGCGSAAA
WKLHYYQWVMQKFEQYNISDAACQFALAALEQVDEAVVPDGNASKVFFSDESATSIKGRL
WANVFKFALDLDKYYDAYCALVSNPDDENRFICLRRFIIVLYERGATKILCDSHLPFIGL
NDKAEQELAWKAACSDISARPNPYKLLYAFEMQQQNWRKAATYIYLYSAQLENESSLRSH
QNTSLVLQERLNGISAAINCLHLVHPMYAWIDSQMCGSHLQSVSHPTKRARTMTEQSGGV
DAQAQRQDSYIGIEKLEDEFVVISAEHLLSLANVQWMNTRSGNLPSDLVDLLVETNFYDM
AFTVVLRFWKDSGLKRELEKVFSAMALKCCPNKASFPMAGSPGLLLTYSKDEMMMEEPFN
LDFQSKKMKSSQWEALEKYLEKYKGFHGRLPVVVAETLLRADPQIELPLWLVNLFKGARR
ESRGMTGQESNPATLFRLYVDYGRYPEATELLVEYVEAYASVRPAGVIYRKRPFATWFPY
TAIERLWCHLEESIRLGHMTDQCEKLKVLLHGALRSHLILLKTDSEDAISSVL
NT seq
4482 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggtattcgaaagtggggatggaggtgcctttcattggcagtgattcaattaag
tgggttgaggcgtctgtcgccgatactcacgcttcttcttcgggttctcggcctatcact
ccgcctaccgaagattgtgcatcgtgttctgttattggcactcctccaacctacctcatt
tggcgtatttgtcggagactgccgcatgctattgaaatactggagcttaatgctgataaa
gacatcccgagggttgggttgcgcatctctttccctgaggcattgtcttcttttgcttat
atatgcaagaatgagataaattctgcttatggcaatgtttatcttctgtatgtattatcc
gtctcgggcattgcttaccttctccgactcaagaatgtctccgcttattctgcttccttt
attttctcgtccaatgagattctacactttgatacaaatatttcccctgactgcttaccc
ataactgctgtcgctgctacaactggttgttttattattgggagagatgatggttcagtc
acttgttttaaacttggcgtgcttgatgaaaatgctccaggttttatgtatgagttgcgg
gatgaggcagctttaagtcgcttgtggggtttaatgtccagaagcagattagcggggtct
gtgagggatttggtggtctcagatatccatggcagaaagatcgtgtttgtgctccattct
gatggaagtctacgagtttgggatcttctccgtcatggaaagctatttagtcaatcttta
agcagtccaggaactgctttttctcggctatgggttggtcctgtggatgttgacgcacat
gcaattcctctggcgatcatgtacacacaatccatgggtgtgaacatgcagggacttggt
atctgtaacctcaatttttcctcgggagagaagtatattttgtcccttggttcttcaatg
cagtatattcctttaacccaggggaaggtgactgatgtgaaattttcatcaaataagata
tgggttctaacggaagacgggttgctggaacatgacttgctttctctaaatgttgacacg
gaaaaagggcatagttactccctgcaggaagcttttattgcagagcaattgttccagagt
tcagaacattccctagattatctttaccaaaccacttgctcaatcttttcgtcatcaaag
gtacagatcattggatttgtttcatctatcttcttacgcaggctactgcatccaggagtg
tatagcagcagtgtcttgcgtttaacattagaagattatgacaagcgctggacagataat
gaatttcaggcgttgaccattgatgaattgagtagggaaatcctgttgttaattgaacat
gaggccatcaatggaagttcattttctgcctttaaatgctggaaagaattttgtttgcgg
tactttgatcgatggcgcaaaagaaatacaccgttcaatttgcttgttgattcaacaagt
ggagctgtgggattgatcagggaaaatgctgtatctatgtttcgttccttggaggatatt
gagctgtttgcatatggcgcttttgaagaactcgaagattttcctaagtttggggttgat
gtgtctagcagtggtcttgagcgtgagatactatttgaagtgcttcgctgctctaggctt
ttaggcagaagattaggcccagtaatttcacctattgtttatgaatcggttgttggtgta
tcagtgacttctactgaggatatagtgcctcgcttgctgaatactgtgaaatgtggttat
aatgcatctgttgcggcatcaaatgtatcagatctaggagctgactttatttggaaaaaa
gagcttttggagcacaaaactttgaggaaattcaccatggacactttaatatccattcat
ggtttgtgcgagaaagctagtggatgggttcgagttctgaatgtgatcgagagctatttg
aatctactagtacctcgaaagcctacgatgagttcagatgtgagtaatgtgacgttgaat
gccaatatatccatcatagtacaggccacctcacaagttgctgaattaatgttcgagtct
gccttgaatgtacttctatttttaagctacattttggacatcagtggccaggttcatatg
cttcctgatgacatgtctagaatccagcttgaacttatacctatggttcatgaaataatt
gccgagtggcttatcatccatttcctggctactatgccttcagaatcacattcggcagaa
gatttcagctctcagttatcgtcactaaagatagatagtgacagtggtaaaggatcatgg
attgcaaagcttggttcagttgatttcaccttggccttcattctggtattggatgctcag
ggatcctctgaggggtggagcaatcagtctttaagttgtcttcctaaaccacaaaacttc
attaatttagtgtcgcatttcagtagctggctagtttggggcatgtctagggaagctcct
ttatatatttttgggcattcaactgagattgcccttagcctactgagacacggccagtat
aatgctgttcagaatttgcttatgatcgtggatgcacatttgagaaatgagaagtcgtct
ataagcattcagaatagtgatggtcagtggtgtgtgcttcatcatcttcgaggatgttca
cttcttgctcaggctcaaagtggactatgtagaacttcaaaggagaaaaaagtttctgaa
gccatgagatgcttcttcagggcttcatctggagaaggggctgcccaagcactgcagaaa
ttatcagatgaggctggattgtcacatttgggaattcctggatgtggctctgctgcagca
tggaagcttcattattatcaatgggttatgcagaaatttgaacaatataacatcagtgat
gctgcttgtcagtttgctttggctgcccttgagcaggtagatgaagctgttgtgcctgat
ggtaatgcatccaaggtctttttctctgatgaatcagcgacttccatcaaggggaggctc
tgggcaaatgttttcaagtttgctttggaccttgataaatactatgatgcgtattgtgct
ctagtttcaaatccagatgatgagaacagatttatttgcttgaggcggtttataatagtt
ctttatgaacgtggtgcaacaaagattctttgtgacagccatcttccctttattggatta
aatgataaggccgagcaagagttagcttggaaggcagcatgttcagatatttcagctagg
ccaaacccttacaagttattgtatgcctttgagatgcaacaacaaaactggagaaaggca
gctacatacatatatttatattcagctcagttggaaaatgaatcgagtctgagaagtcac
cagaacacttcacttgttcttcaagaaaggctgaatggaatttctgctgctatcaattgc
ctccaccttgtccatcctatgtatgcctggatcgactctcagatgtgtggaagtcatttg
caaagcgtgtctcatccaactaaaagagctagaacaatgacggaacaatcaggtggagtt
gatgcccaggctcaaagacaggattcgtacattggtattgaaaaactagaagacgagttt
gtggtgatatctgcagaacatttgctttcccttgcaaatgttcaatggatgaatactaga
agtggaaatttgccatcagatcttgttgaccttttagttgagacaaatttttatgatatg
gcattcacagttgtgctgcggttttggaaggattctggattgaagagggaacttgaaaaa
gtcttttctgccatggcactgaaatgctgcccaaataaagccagttttccaatggccggg
tcacctggtcttttattaacatattcaaaggatgaaatgatgatggaagagccatttaat
ctggatttccaatcaaaaaaaatgaagagcagtcagtgggaagcacttgagaaatatctt
gagaagtacaaaggatttcatggaagactacctgtagtagttgcagaaactctcctccgc
gctgatcctcagattgaactgcctctttggttagttaatttgttcaagggtgcacggaga
gaaagcaggggcatgactggccaagaatcaaatccagctactctttttagattatatgtt
gattatgggcgatatccagaggccacagagcttctggttgagtacgtagaggcttatgct
tcagtgagaccagctggtgtaatttatcgcaaaagaccttttgcaacttggttcccttac
acagcaattgagcgcctgtggtgtcaccttgaagagtcaatacgtttaggtcacatgact
gatcagtgtgaaaaattaaaagtgcttttgcatggagctttacgaagccatcttattctg
ttgaaaaccgactcggaggatgctatttcttctgtcctttga
DBGET
integrated database retrieval system
