Spinacia oleracea (spinach): 110784124
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Entry
110784124 CDS
T05137
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soe03000
]
110784124
04121 Ubiquitin system [BR:
soe04121
]
110784124
Transcription factors [BR:
soe03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
110784124
Ubiquitin system [BR:
soe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
110784124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
R3H
NCBP3
Motif
Other DBs
NCBI-GeneID:
110784124
NCBI-ProteinID:
XP_021844229
UniProt:
A0A9R0I7S3
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All DBs
Position
3:complement(3212903..3217300)
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AA seq
1180 aa
AA seq
DB search
MSFQTQDVRRDRSRFPGQNGRQQAQAQAQQWVARGPGILTSPPSNFNVYAGQNAGDGLER
PGQFDSRERQGQFDSRERQGQFDSRERQGQFDSRERQGQFDSRERPGRWDNRERQGQTES
RGGRGFRGGGGGGGGGGRSHMGRPQYLRRERNETREGVEEKGAAVNKDKGNQKKWGGKVV
DSDLPQLVQEIQEKLSKGTVECMICYDMVRRNAPVWSCSSCYSIFHLNCIKKWARAPTSA
DTSAEKIQGFNWRCPGCQAVQLTTSKDIRYLCFCGKRHDPSSDLYLTPHSCGEPCGKPLE
REIPRPGLSKEVMCPHLCVLQCHPGPCPPCKAFAPPRPCPCGKKVITTRCSEQKSVHTCG
QVCDKILECGRHRCNRKCHVGPCEPCQIPVDSSCFCKKRSEVVICGDMSLKGEISPDNGL
FSCSSTCGSKLRCGNHYCAEICHPGPCGECDLLPSKVKTCYCGKTILKVPRRSCLDPIPT
CSGTCNKRLPCGKHYCKDKCHSGDCSPCSEFVTQKCRCGSTSRTVECYKTTLAGEKFVCD
RQCGRKKNCGRHRCSERCCPLSDSSNTISISNDWNPHLCSMPCGKKLKCGQHSCEAFCHC
GHCPPCLETIFTDLTCACGRTSIPPPLPCGTPPPTCQYPCSVPQPCGHQSTHSCHFGDCP
PCSIPIAKECVGGHVVLRNIPCGSKEITCNKLCGKTRRCGLHACARSCHAAPCDQTGGSS
SDSALIKGSCGQVCGAPRRDCRHTCQALCHPTALCPDSRCEFPVTITCSCGRITATVPCD
AGGGSNSGFSAVNFLEASTLQKLPAPLQPVEANEKRVPLGQRKLMCDDECAKLERKRVLA
DAFDISQPSLDALHFGENSAVSQVLSELLRRDPKWVLAVEERCKHLVLGKGKVNSTSNIK
VHVFCTMQKEKRDAIRLIAERWKLTISAAGWEPKRFVVVHATPKSKAPARIIGPKGLAAV
NAHHPPGFDPLVDMDPRLVVALLDLPSDADISTLVLRFGGECELVWLNDKNALAVFSDPA
RAATAMRRLDNGSVYQGAAVVQHSGAGTAAVTAWGGAPAAAASSGPKGNPWKKTGLKDGN
NWVEDSWGEEEEWSSGQATSDVGPSSSTKGREPSVTTTMNRWTVLNPESSLGSTRAMDNA
KRTAAAAEPTTSDREIKTAPLNSVTDDSAEVVDDWEKAYE
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgagttttcaaactcaagatgttcgtagagatcgttctagattccctggccaaaatggt
cgccagcaggcccaggcccaggcccaacagtgggttgcaagaggtcctggtatcttaact
tctcctccgtcgaacttcaacgtttatgccggtcaaaatgccggtgatggccttgagagg
ccggggcaattcgacagtagagagagacaggggcaatttgacagcagagagagacagggg
caatttgacagtagagagagacaggggcaatttgacagtagagagagacaggggcaattt
gacagtagagaaaggccgggccgatgggataatagagagagacagggacaaacggaaagt
agaggaggtcgaggatttcgaggaggtggtggaggtggtggtggtgggggtcgaagtcat
atgggtcgacctcagtacttaagaagggagagaaatgaaacaagggagggtgtggaagag
aaaggagcagctgtaaacaaggataaaggtaatcagaaaaaatggggaggaaaagttgtg
gattcggatttacctcaattggtgcaagaaattcaagagaagttaagtaagggaactgtg
gaatgtatgatttgttatgatatggtgagaaggaatgctcctgtttggtcttgctcaagt
tgctactctatttttcacttgaattgtatcaagaaatgggctcgtgcgcctacttctgcc
gatacatctgctgagaaaatccagggattcaattggcggtgccccggatgtcaagcagtg
cagctaacaacgtcgaaggatattcgttatctttgcttttgtgggaagaggcacgacccg
tcatcagatttgtacttgacaccacactcttgcggcgagccttgtggaaaaccgttggag
agggaaattccaagacctggtttaagcaaggaggttatgtgtcctcatctttgcgtgttg
cagtgtcatcccggtccgtgtcctccatgcaaggcttttgcgcctcctcggccttgtcct
tgtggcaaaaaagtaattaccacaagatgttccgaacagaagtctgtgcacacttgtggt
caggtctgtgataagattctcgaatgtgggcgtcaccgttgtaatcgaaaatgtcatgtg
ggtccgtgtgagccgtgtcagattcccgtagactcctcttgcttctgtaagaagaggtcc
gaagtggttatttgtggagatatgtcattgaagggagagataagcccggataatggtctt
ttctcttgtagttctacatgtggaagtaagttgaggtgtggaaaccattattgcgctgaa
atttgccacccgggcccatgtggggagtgtgacttgttacccagcaaagtgaagacctgt
tattgtgggaagactattctcaaggttccgcgaaggagttgtcttgatccaataccgaca
tgttcaggtacttgcaacaagcgtcttccttgtgggaagcattactgtaaggataagtgt
cattctggagattgttctccgtgctctgagtttgtcactcaaaaatgccgctgtggttca
acttctcgcaccgtggaatgctataaaaccacactagccggtgagaaattcgtctgtgat
cgtcaatgtgggcgtaagaagaattgtggaaggcatcgttgtagtgagcgttgctgccct
ctttccgattctagcaacactatatctatatctaatgattggaacccacacttgtgttct
atgccgtgtggaaagaagttgaaatgtgggcagcattcctgtgaggctttctgtcactgt
ggccattgccctccttgcttggaaacaatttttaccgaccttacatgcgcgtgtggaagg
acttcaatcccaccacccttaccttgtgggacccctcctcctacgtgccaatatccgtgt
tctgttcctcaaccttgtggccaccaatctactcacagctgccattttggagactgccct
ccttgttcaattcccatagcaaaggaatgcgtgggtggtcacgtggttcttcgcaacatt
ccatgtgggtcaaaggagataacttgtaacaaactttgtggaaagacgaggcgatgtggg
ctccacgcctgtgccaggagttgccacgcggcaccctgtgatcaaacgggtggatcttca
tcagattctgccctaataaagggttcttgtgggcaagtttgtggtgcaccgaggagagat
tgtagacacacatgtcaagctctctgccaccctacggctctttgtcccgactcgagatgt
gaattccctgtgacaatcacatgctcttgtggtagaattacggcaacggtgccttgtgat
gctggtgggggaagcaattcagggtttagtgctgttaattttctagaagcttctactctt
cagaagcttccggcaccacttcaacctgtggaagcaaacgagaaaagagttccactcgga
cagaggaagctcatgtgtgatgatgaatgtgccaagcttgagaggaagcgtgttcttgca
gatgcttttgatatttctcagcctagtcttgatgctcttcattttggtgaaaattcagct
gtttcacaagtgttatcagaattacttcgccgtgatccaaaatgggtacttgcagttgag
gagagatgcaaacacttggtactcggaaaaggcaaagtaaatagtaccagcaatatcaag
gttcatgtgttttgtacaatgcagaaggagaaacgagatgcaatccggctaatagcagag
agatggaaactaaccatcagtgctgctggttgggagccaaagcggttcgtagtggttcac
gccactccaaaatccaaagccccggctcggattattggacctaagggtttagccgcagtg
aacgcccaccacccgcccggttttgacccgctggtggatatggaccctaggcttgttgtt
gccctgcttgatcttccaagtgatgcagacatcagcacgttggttctacggtttggtggt
gaatgtgaactggtgtggttgaatgacaagaatgcccttgctgttttcagtgatcctgct
cgagcagcaactgctatgagaaggttagataatggatcggtttatcaaggtgctgctgtc
gttcaacacagtggtgctggaactgctgcagtgactgcttggggaggtgcaccagcagct
gcagcttcttcaggtcctaagggtaacccctggaaaaaaacgggtttgaaggatggtaat
aattgggttgaagattcatggggtgaggaggaggagtggtctagtggtcaggctacatct
gatgtgggaccctcttcatcaacgaaaggccgtgagccatcagtgaccacgacaatgaac
cggtggacggttctgaaccccgaatcttcattgggctcaacaagagccatggacaatgcc
aaaagaactgcagcagctgctgaacccactacttctgacagggaaataaagactgcacca
ttaaacagtgttactgatgacagtgcagaagttgtagatgactgggaaaaggcttatgag
tga
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