Spinacia oleracea (spinach): 110784283
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Entry
110784283 CDS
T05137
Name
(RefSeq) ATP-dependent DNA helicase Q-like 4A
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03440
Homologous recombination
soe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110784283
03460 Fanconi anemia pathway
110784283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
soe03032
]
110784283
03400 DNA repair and recombination proteins [BR:
soe03400
]
110784283
Enzymes [BR:
soe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110784283
DNA replication proteins [BR:
soe03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
110784283
DNA repair and recombination proteins [BR:
soe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
110784283
Bloom's syndrome complex (BTR)
110784283
FA (Fanconi anemia) pathway
110784283
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
RecQ_Zn_bind
HRDC
ResIII
Motif
Other DBs
NCBI-GeneID:
110784283
NCBI-ProteinID:
XP_021844419
UniProt:
A0A9R0JRL8
LinkDB
All DBs
Position
4:169324401..169336568
Genome browser
AA seq
1240 aa
AA seq
DB search
MSGMSVFAGQECNKKAPKVNWDEHVKSHNNFATQNEFLSSSFLFSLPTQKPRPEGRMMTC
QVQSIGRSQVEQAWKSLSSLQLGRRNYVRPGKTVQPVKNVNAVQFPGKHGVPEKSYGNNM
KNSVNQEWHHKVTESKDKAGNPTRYYSASTPMHQTVEAGMGEAKLLHSSHLPIREGSLHH
NVKSTSDSKGPDEAVIDVINDDDILGNIDVDQIVMEHYQSSCTPQPAGSKSLQATPMADK
YVIARHDETSLPPELCCNCSHGYKLGLCPEGTIHLQEMKDMLIVISNELLDNLDLTPERM
EKLRQDRLQLNKQIQLMETHVRNMTIDVEMQNSQFSATTENVRGYNHDTSQATFRSNAYD
TPQATFRSNAYDTPQATFPSNGYDAPQASGFMTDPMRLDNRFNNFDESSGYNRSDLSSVS
FSSMERFDFSSAPVDRESYKPRVVDVNYIEGSNDRKWSSWDFPWTKNLETNNKKVFGNHS
FRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALVCPGVTLVVSPLVSLIQDQIMHL
LQANIPAAYLSANMEWSEQQEILRELCSDNCRYKLLYVTPEKIAKSDVFLRNLEKLYSLD
LLARIVIDEAHCVSQWGHDFRPDYQSLGILKQKFPATPVLALTATATAVVKEDVVQALGL
ANCIVFRQSFNRPNLSYSVMPKTKKCLEEFDKFIRANYFDECGIIYCLSRMDCEKVAEQL
QGYGHKAAFYHGTMDAAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSIPKS
VEGYHQECGRAGRDGLRSSCVLFYSYSDYIRVKHMLSQGAIEQNAFASTHNRLNSSNPGR
IMETNMENLQRMVSYCENEVDCRRLLQLAHFGENFDPAHCKKTCDNCSKVKSSIEKDVTQ
VAIQLVELVKSTGQQFSSAHILEVFRGSLSQYVKKHKHNTQKLHGAGKGLAKGEASRVLR
HLVVENILVEEVKKSDIYGSVSSVLKVNECKCRNLFFGGQKIILRFPSIAQSTLKFTKAD
ATPAKSSPIFGKTSPLQSHNSKPESEADLDISAKLFPALRLLRTALMKEGGDRVMAHHIF
SNTTLQLISRKVPRTKEELLEVNGIGNVKLKKYGDRLLETIEATIKQHNNINKNSSSSND
SADSIKRRREAAKVSSNGTSNGDEDMMGSTGRSKKRVVAAGKTSEIKPMEVDVFSDCLDA
DLDYDDQVFEMQANNGLINPMGETNVNGRKLPVWPGQRKI
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggatgagtgtttttgctggacaagaatgcaataagaaggctcctaaagttaat
tgggatgaacatgtgaaatcacataataactttgctacgcaaaatgagttcctgagctcg
agttttcttttttcgctacctacacaaaagccgcgtcctgaagggaggatgatgacttgc
caagttcagagtattggtagatcacaggtggaacaggcctggaagtccctctcgagcctt
cagctcggtcgcaggaactatgtcaggccagggaaaactgttcagccagtgaaaaatgta
aatgctgttcagtttcctggaaaacatggggtgccagagaagtcatatggtaacaacatg
aaaaattctgtaaatcaggaatggcatcacaaagttactgaaagcaaagataaagctggt
aatcccacaaggtattattctgcctcaactccgatgcatcagacagttgaagctggaatg
ggtgaggcaaaattgttgcacagttctcatttaccaattcgtgaaggttcacttcatcat
aatgtcaagtcaacaagtgatagcaaagggccagatgaggcagttattgatgtgataaat
gatgatgatattcttgggaacattgacgttgaccaaattgtcatggagcactaccaatca
agttgtactcctcagcctgctggttctaagtctctacaagcaactccaatggcagataaa
tatgttattgcaagacatgacgaaacctcattgcctccagaattgtgctgtaattgcagt
cacggatacaagctaggattatgtccagaagggacaattcatctgcaagagatgaaagac
atgttaattgtcatatcaaatgaattgcttgacaatttggatttaactcctgagaggatg
gagaagcttcgacaggacaggttgcagctaaataagcaaattcagttgatggagactcat
gttcgcaatatgactattgatgtggagatgcagaattcacagttttctgcaacaacagaa
aatgtaaggggttataatcatgatacatctcaggctacctttaggtcgaatgcatatgat
acacctcaggctacctttaggtcgaatgcatatgatacacctcaggcaacctttccgtcg
aatggatatgatgcacctcaggcatctggcttcatgacagatccaatgagattagataac
cgatttaacaattttgatgagtcaagtggttataatcggagcgatttgtcatcagtttca
ttctcttctatggagaggtttgatttttcatcagcacctgtggacagagagtcatataaa
ccgagggttgttgatgtaaattacatagaaggttcaaatgacaggaaatggagtagctgg
gactttccatggaccaagaatttggagactaacaataaaaaggtgtttggtaaccattct
tttcgacccaatcaaagggaaataatcaacgcaaccatgagtggtcatgatgtttttgtt
ttaatgcctactggaggaggaaaaagtttgacttatcagcttcctgctctcgtttgtcca
ggagtaactttagttgtatcaccactggtttctctcatccaagatcagattatgcatctt
ttgcaggcaaatataccagctgcttacttgagtgccaacatggaatggagtgaacagcaa
gagatacttagagaactttgttcagacaattgcagatataagctcttgtatgtcacgcct
gaaaaaattgcaaaaagcgatgttttcctgcgaaatctagagaagctgtattctcttgat
ttacttgccaggattgttattgatgaagcccattgtgtcagtcagtggggacatgatttt
aggcctgattatcagagtcttggtatcttgaaacagaagttcccagccacgccagtgttg
gcgttaactgctactgcaacagcggttgttaaggaagatgttgtgcaagctcttggtctt
gctaactgcattgtttttcggcaaagtttcaaccgtccaaatttgtcgtattcagttatg
cctaaaacaaaaaagtgcttggaggaatttgacaagttcattagagcaaactactttgat
gaatgtggtattatttattgcctatcaagaatggattgcgaaaaggttgctgaacagtta
cagggttatggacataaagcagctttttaccatggcactatggatgctgctcaacgtgcc
tttgttcagaaacaatggagcaaagatgaaatcaatataatatgtgcaactgtggccttt
ggaatgggtatcaataaaccagatgttcgattcgtgattcatcactccatcccaaaatct
gttgaaggataccatcaggaatgtggtcgtgctggtagagatggcctacgctcatcttgt
gtgttgttctacagttacagcgattatattcgtgtcaagcatatgctcagtcaaggagcc
attgagcaaaatgcattcgcatctacacataatcgtttgaattcatcaaatcctgggagg
ataatggaaacaaacatggagaaccttcaacgcatggttagctattgtgaaaatgaagtt
gactgtcgacgccttctacagcttgctcactttggagaaaattttgatcctgcacattgt
aaaaaaacatgtgacaattgctctaaggttaaaagttctattgagaaggacgtgacacaa
gttgcaatacaattggtggagctagtgaagtcaacggggcagcaattctcatcagcacac
atattagaagtcttccggggttctttaagccaatatgtcaagaaacacaaacataatact
cagaaacttcatggagctgggaaaggtttggcgaagggtgaagcatctcgagtgcttcgt
caccttgttgttgagaacattcttgttgaggaggtcaaaaaaagtgatatctatggatct
gtatcatcagttttgaaggtcaatgaatgcaaatgtagaaatctcttttttggcggtcaa
aagataattttaagatttccatcaatcgcccaatcaacattgaaatttaccaaagctgat
gcaacgccagcaaagtcgtcgcccatttttgggaaaacaagtcctctgcaaagccataat
tctaagccagaatcagaagctgacttggatatttctgccaaattgtttccagctcttagg
ttgctaagaacagccctcatgaaagaaggcggtgacagggtcatggcacatcacatattc
tcgaatacgacattgcaattgatcagcagaaaggtacctagaaccaaagaagaattgcta
gaggttaatggcatcggaaatgtgaaattgaaaaagtatggtgatcgtctgctagaaacc
atagaagctaccattaaacaacacaacaacataaataagaacagcagtagcagcaatgat
agtgcagattcaataaaaaggagaagagaagctgccaaggtttcttcaaatggaacatct
aatggtgatgaagacatgatgggaagcacagggagatcgaagaagagagttgtcgcagca
gggaagacttctgaaatcaaaccgatggaggttgacgtgtttagtgactgcttagatgct
gatcttgattatgatgatcaagtttttgagatgcaggctaataatgggttaataaatcca
atgggtgaaacaaatgttaatggaagaaagctgcctgtttggccaggacaaagaaagatt
taa
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