Spinacia oleracea (spinach): 110784636
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Entry
110784636 CDS
T05137
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe00040
Pentose and glucuronate interconversions
soe01100
Metabolic pathways
Module
soe_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110784636
Enzymes [BR:
soe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110784636
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
110784636
NCBI-ProteinID:
XP_056692263
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Position
2:complement(105711236..105716777)
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AA seq
418 aa
AA seq
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MGTLTLGPNIVLGHIEFFVLIVVYVLLSVSQLIFCIRTPNGSILTSSSQFNVMNYGAIGD
GLQDDTPAFSKAWADVCGAIGEIPTLTIPAGKTFLLTPISFHGPCKSSNIHVEIQGKLVA
PDNRGSWKNCEANCWIVFSSVENLIVDGSGKINGTGSIWWQNNDPTTRDNALCLINCNGL
RLQGLTHVDSPKSHISISGCNNSIISNLQIMAPETSHNTDGIDIISSNRVHISDSIIQTG
DDCIAIGSHTSWLNITGITCGPGHGISVGSLGKEGEDAKVEEIYVKNCTFKGSLNGARIK
TWQGGLGYARNIIFEDIPLIDVGNPIIIDQYYCDGAKNCGTAQSGVKVTGVSYRGFHGTS
KTAAAISLNCSSTVACTGIVMESINIVSSTSSYDTYAVCINAQGKQSLVAPQVPCLTH
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgggcactctcacattgggcccaaatatcgtgttgggccatattgagtttttcgtctta
attgttgtgtatgttcttctaagtgtctcccagcttattttttgcatccgcacaccgaat
ggtagtattcttacttcatcgtcacagtttaacgtgatgaattatggagccattggagat
ggcttacaagacgatactcctgcattttcaaaagcatgggcagacgtatgtggtgctata
ggtgaaattcctacactaacgataccagcaggaaagacattcctattaactccaatttct
ttccatggtccttgcaaatcaagcaacattcacgtcgagatccaaggaaaattggtggca
ccggacaaccgcggttcatggaaaaattgtgaagctaactgttggatagttttttcaagc
gtagaaaacctcattgtagacggatcaggaaagatcaatggcacaggctcaatttggtgg
caaaataatgacccaacaacccgtgataatgctctatgtttgataaattgcaatggtctt
cgattacaaggattaacgcatgtagacagtcccaaaagtcatatatcgattagtggttgt
aacaattcaattatctctaatcttcaaataatggctcctgaaaccagccacaacactgat
ggaatcgatattatttcttcgaatcgtgttcatataagtgattccattattcaaacaggt
gatgattgtatagcaataggatcacacacatcatggcttaacataactgggataacttgt
ggacctggccatggaataagcgtcggaagcttgggaaaagagggtgaagatgctaaggtt
gaagaaatttatgtaaaaaattgcacttttaaaggaagtttaaacggtgcgagaatcaag
acatggcagggcggattgggttatgcaagaaacataatatttgaagatatccctctgata
gatgttggaaacccgattattattgaccaatattactgcgacggtgctaaaaattgtgga
actgcgcaatcgggtgtgaaggtaacgggggtgagctatagaggcttccatggaacatca
aaaacggcggccgcgattagtttaaactgcagcagcacggtggcttgcaccggcatcgtc
atggagtccatcaatatagtttcttcaactagttcatatgatacgtatgccgtttgcatt
aacgctcaagggaaacaatcacttgttgcacctcaagtgccttgcctaactcattga
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