Spinacia oleracea (spinach): 110784679
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Entry
110784679 CDS
T05137
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110784679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110784679
03036 Chromosome and associated proteins [BR:
soe03036
]
110784679
Messenger RNA biogenesis [BR:
soe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110784679
Chromosome and associated proteins [BR:
soe03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110784679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
110784679
NCBI-ProteinID:
XP_021844826
UniProt:
A0A9R0JRV5
LinkDB
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Position
4:154533722..154553419
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AA seq
1050 aa
AA seq
DB search
MECDTLRDPFSSRTFNFEYSSSLQISSPRKKRKTNRVKYDGFFPILRSSDYYTEPPLKEL
AELEEIYPGYCSKIKDFTVGRVGFGSVKFLGETDVRRLDLREIVKFNRHEVVVYEDESSK
PDVGEGLNKPAVVTLFLKFETLSFDRSKFCKVVDRLRASTDRQGAEFISYAPLNGEWKFS
VRHFSRFGLSMDDEDDIVMDDADVNPCEDPVEMNGSVGFGDGEDDDIGSDGFDMGENSAE
LSHSLPAHLGLDPARMKEMKMLMFSGEDDEDENYDDILSLEKQGAYAEKFRLYNSGLRVN
YKPSPPPPRKTPVPLLEYKSNSLDVNAPGTLLLSQQHKGSPLRVVKPDGFKLNYKQETPV
SGYHSRNIVDAGLFMGRSFRVGWGPNGLLVHSGVPVSSNDSQGILSSVITLEKVAIDKVT
RDESNEVKKDAVDSLFKSPLDLHKSLDHRILEVEVGSLKLSLQEVVCDRSALSDICRRYI
EVVERQLEVPGMLPPVRMSLMHQVIVWELIKVLFSERETSGRTVFGVEDHEEDMMLDGKA
IRSEIDPESLPLMRRAEFSYWLQESVYHRVQEDLSCLSESDDLEQIFLFLTGKQLDAAVE
LSASRGDVRLACLLGEAGGSMVNRSDVARQLELWRTNGMDFNFIEKERIRLFELLSGNIH
SALAGKSIDWKRFLGLLMWYELPPGTSLPAVFHTYQHLLIEGKAPYPVPVYIDEGPVEET
VKVDTEGRYDLAYYLMLLHASEDGKFDGLKSMFSAFASTNDPLDYHMIWHQRGILEAIGA
FSSSDLYILDMAYVSQLLCLGKCHWAIYVVLHMPYCDDFPYLHSTVIREILFQYCDTWST
QEEQRKFIEELGIPSQWLHEAMAVYFQYYGDLAKALEHYIRCFCWQKAHSIFITSVAHSL
FLSAEDSEIWRLAMSLEDHKSEIEDWDLGAGIYISFYLLRSSLQCDEDDINKLDTLESKE
AACREFFDCLNKSLEVLGSRLPTDGRVVYSKMSEEICSLLVSDSGADSTRETQLSCFDTI
AAAPIPEDLRSCHLQEAVLLFTTFLSETTT
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggaatgtgatactttgcgtgaccccttttcttcaagaaccttcaattttgagtattca
tcttcactgcaaatttcatcaccacgtaagaaaagaaagacaaatcgggttaaatatgat
ggttttttcccaattttacgatcctcggattattatactgaacctccattgaaggagtta
gctgaattagaggagatttatcctgggtattgtagtaaaattaaggattttacggttggg
agggtagggtttgggagtgtgaagtttttgggggagactgatgtgagacggttggatttg
agggagattgttaagtttaataggcatgaagttgttgtttacgaagatgagagtagtaag
cctgacgttggtgaagggttaaacaagcctgctgttgttacattgtttctgaagttcgaa
acgttgagcttcgatcgttctaagttttgtaaggtagttgataggttgagagctagtacg
gataggcagggagcggagtttatttcgtatgccccgttgaatggggaatggaaattttcg
gttaggcattttagtcggtttgggttgagtatggatgatgaggatgatattgtgatggat
gatgcggatgttaacccatgtgaggatcctgttgagatgaatggcagtgttggttttggt
gatggtgaagatgatgatattggtagtgatgggtttgatatgggtgagaatagtgctgag
ctttctcactcacttcctgctcatcttggacttgatcccgctcgaatgaaagagatgaaa
atgttgatgttttctggtgaagacgatgaggatgaaaattatgatgatattctatctctt
gagaaacaaggagcttatgcagaaaagtttcgattatacaactcagggttaagggtgaac
tataaacccagtcctcctcctcctaggaagactccagtacctttgcttgagtataagtct
aacagtttggatgtgaatgctcctggtactcttctattatcacaacaacataaaggatcg
cctttgagggtggttaaaccagacggttttaaactgaactataagcaagaaacaccagta
tctggttatcattcgcgaaatatagttgatgcaggattgtttatgggtcgatcatttcgt
gttggttggggacctaatggtctcctcgttcatagcggtgtacctgtcagtagtaatgac
agccaaggaatattgtcttctgtaataacgcttgaaaaggttgcaatagataaggtcact
agagatgaaagtaatgaagtgaaaaaggatgctgttgattcactttttaagtctccctta
gatcttcacaagtctttggatcataggatacttgaagttgaagttggatccttgaaatta
agcctccaagaggtcgtatgtgatcgttcagctctctcagacatatgtcggcgctatata
gaagtagttgagaggcaacttgaggttcccggtatgttgccacctgttcgtatgtctttg
atgcaccaagtgattgtgtgggagctgattaaggtccttttctctgaaagggagaccagt
gggcggacagtgtttggggtagaagatcatgaggaagatatgatgctggatggaaaagcc
atccgctcagaaatcgatcctgaatcactccctttgatgcggagggcagagtttagttat
tggttacaagagagtgtgtaccatcgggtgcaagaagatctgagctgtttgagtgagtct
gatgatttagaacagatatttcttttcctgactgggaaacagttggatgctgctgttgaa
ttgtctgcttctaggggggatgtgaggctggcctgtttgctaggagaggctggtgggtct
atggtgaatcgttctgatgtagctcgacagttggagttgtggagaactaatggtatggac
tttaacttcattgagaaagaaagaatacgactttttgaattgctttcgggtaatattcac
agtgcattggctggcaaaagcattgactggaaaaggttcctggggttgttgatgtggtat
gaattaccaccaggaacttccctgcctgctgtttttcatacctaccaacatcttcttatc
gaaggaaaggctccttaccctgttccagtttatattgacgagggaccagttgaggagaca
gttaaagttgacacagagggacggtatgaccttgcatattatctgatgctgcttcatgct
agtgaagatggtaaatttgatggtctcaaatctatgttcagtgcttttgcatcaaccaat
gatccacttgactaccatatgatctggcatcagcgtggaattctcgaggcaattggtgcc
ttcagttctagtgatctttatattcttgatatggcatatgtttcccagcttctttgtcta
gggaaatgtcattgggccatctacgttgtcctccacatgccctattgtgacgattttcct
tatctccactctactgttatccgagagatcttgttccaatattgtgatacctggagtacc
caagaggagcagcgcaaatttattgaggagttgggtattccatcacagtggttgcatgag
gctatggctgtgtattttcaatactatggtgatcttgcaaaggccctagaacactacatt
agatgtttctgttggcaaaaagctcattcgattttcataacatccgtggcccattcctta
tttttatcagctgaagactctgagatttggaggttggccatgtcattggaggatcacaag
tcggagattgaagactgggacttgggagctggaatttatatctcattttatctgctgaga
agctctctgcagtgtgatgaagatgatataaacaaactggatactcttgagagtaaagaa
gcagcttgtagggagttctttgattgcctaaacaagtctctagaagtactgggaagcaga
ctacccacagacggaagggtggtctattcaaagatgtcagaagagatatgcagtttgctt
gtgtccgatagtggagctgattcaacacgtgagactcagttgagctgctttgacaccata
gctgctgccccaattcctgaagatctccgttcttgtcatctgcaggaggcagtgttactt
ttcaccacttttctttcggagacaaccacctaa
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