KEGG   Spinacia oleracea (spinach): 110785367
Entry
110785367         CDS       T05137                                 
Name
(RefSeq) THO complex subunit 4D-like
  KO
K12881  THO complex subunit 4
Organism
soe  Spinacia oleracea (spinach)
Pathway
soe03013  Nucleocytoplasmic transport
soe03015  mRNA surveillance pathway
soe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:soe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110785367
  09122 Translation
   03013 Nucleocytoplasmic transport
    110785367
   03015 mRNA surveillance pathway
    110785367
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:soe03019]
    110785367
   03041 Spliceosome [BR:soe03041]
    110785367
Messenger RNA biogenesis [BR:soe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     110785367
    TREX complex
     110785367
Spliceosome [BR:soe03041]
 Complex C
  Other components
   EJC/TREX
    110785367
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    110785367
SSDB
Motif
Pfam: RRM_1 FoP_duplication YHR127W_C
Other DBs
NCBI-GeneID: 110785367
NCBI-ProteinID: XP_021845492
UniProt: A0A9R0IAF0
LinkDB
Position
3:102740420..102752165
AA seq 286 aa
MDKALDMSLEDIIKSKKSAGKGRGQGGAPRGRGAKGSVSGGKMRGIGRGAGRRAPLGVNT
RASSFSIAKSFRRTKNFPWQQDLLEESLAAAGIPAMENGTKLNITNLERGVSNDDIRELF
SEIGELKRYAVHFDKNGQPSGSAEVVYAKRSDAFAAHKRYNNVQLDGRPMRIEVASPNSG
GPVSARVNVFGGSNGKASRRVVMTQRGGRTASSAQTNRNVGQRTRGGFKNGQGRAPTQAR
AQTQPRGTGRGQSRGRGRGRGKKLDKSAEDLDKELENYHAEGMQIS
NT seq 861 nt   +upstreamnt  +downstreamnt
atggataaagctttggatatgtctttagaagatatcattaagagcaagaaaagtgcaggc
aaaggtagaggacaaggtggtgctcctagagggcgtggagctaaaggatctgttagtggt
ggaaaaatgagaggaataggtagaggggcagggcgtcgggcacctcttggagtaaatact
cgagcttcatctttctctatagccaagtcttttcgcagaaccaagaacttcccatggcaa
caagatttgttagaagaaagccttgcagctgcaggaatacccgcaatggaaaacggtaca
aagttgaacattacaaacttggaacgtggagttagcaatgatgatataagggagcttttt
tctgagatcggggagctgaaacgttatgctgttcactttgacaaaaatggtcaacccagt
ggatcggcagaagtcgtctatgcaaaaagaagtgatgcatttgctgcccacaagcgatac
aataatgttcaacttgatggaaggccaatgaggattgaagttgcaagccctaactcggga
gggccagtgtctgctcgtgtaaatgtctttggaggctctaatggaaaggcatcaaggaga
gttgtaatgacgcaaaggggtggtcgtacagcttcatcagctcagacaaatcgtaatgtt
ggacaaagaacaagaggtggcttcaagaatggccaaggacgtgcaccaacacaagcccgt
gcacaaacacaaccacgaggcactggccgtggccaatctcggggaagaggaaggggtcgt
gggaaaaaactagacaaatctgctgaggaccttgacaaagagctagagaactatcatgct
gaagggatgcagatttcctag

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