Spinacia oleracea (spinach): 110785764
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Entry
110785764 CDS
T05137
Name
(RefSeq) protein LATE ELONGATED HYPOCOTYL isoform X1
KO
K12133
MYB-related transcription factor LHY
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
110785764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soe03000
]
110785764
Transcription factors [BR:
soe03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
110785764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
110785764
NCBI-ProteinID:
XP_021845971
UniProt:
A0A9R0IB57
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Position
2:106502036..106514194
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AA seq
765 aa
AA seq
DB search
MDVYSSGEEPIIKTRKPYTITKQRERWTEEEHNRFLEALKLHGRAWQRIEEHIGTKTAVQ
IRSHAQKFFSKVHRTSLAILAYCKMPFHRLKIISRLLLEKEALVKGVPIAQAIDIEIPPP
RPKRKPSNPYPRKTGAISSPNTQVKAKDGNQIPPGSIHTTEQVLDSEKEQLAEEAVGGDA
ESSPKETDGSDKCSTEAFTLLRKAPSALGTSSNEVPAMAVGSARKLSNFMEFVPIKKPVA
DNETRDLNAAAGHNRNHKPDKSDVVDMIQNDSENETNAAKTFPRHAPVHILDGNLGSCSQ
GLSSDVSYQEPAFHHMGIPDQPSLFSNPTVSAAVESQTSTSRSTNHQIFPNSHPPFSPFP
NNQENYSSFLQMSSTFSSMIVSALLQNPAAHTAASFAASFWPCAIENSANSTVGGYPHRQ
MNPTPSVAEIAAATVAAATAWWAAHGLLPLCTPPVHAGFSLPPTSVSAPLANFGQTPVAN
EEREEIKNSQVPEPQVQQCNQELSEALQPQHSASKSSATSSPDSGNITSAKMDVEVAADN
NEKNNVPASSEQKDANKGKSKKQVDRSSCGSNTPSGSDIETDALKKNDLGKEEANEPDVS
RPTTSEPSSRRNRLIGNIYESWKEVSEGGRLAFQALFSREVLPQSFSPPLNVTGKNQEVN
VTVGENRNNAEKGYSGIQFDLNSNAWEFCSSNQGIENLKLREEDNRKEGLLTFSLEHGNL
NTTNRTGFKPYKRCSVEAIESTAMNSNAQQEKCSKRLRLDGEAST
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttattcttccggcgaagagccgatcattaagactcgaaaaccttacacgatc
acaaagcaacgtgagcgatggacagaagaggagcacaataggtttctcgaggcgttgaaa
ctacatggtcgagcttggcagcgaattgaagaacatatcgggacaaagaccgctgtccaa
ataagaagtcatgcacagaagttcttttcaaaggtccatcggacttcacttgcaattcta
gcatactgcaaaatgccgttccatcgattaaaaatcatttcgcgacttctgttggaaaag
gaggctcttgttaaaggtgttccgatagcgcaagctattgacatagaaattcctcctcca
cgtccgaaaaggaaaccaagcaatccttatcctcgcaagactggcgctataagttcccca
aatacgcaggttaaagcaaaggatgggaatcaaataccaccaggttctatacatactaca
gaacaagttttagattcagaaaaggagcaacttgctgaggaagctgttggtggtgatgcg
gaatcaagccctaaagaaactgatggcagtgacaaatgcagcactgaagcctttacgctt
cttcgtaaagcaccatctgccttgggaacatcttccaatgaagtcccagccatggctgtg
ggatcagctagaaagttatccaactttatggagtttgtgccaataaagaaaccagtagcc
gacaatgaaacacgagatcttaatgctgctgccggacacaacagaaatcataagcccgat
aagtctgatgttgttgacatgattcagaatgactcagaaaatgaaacaaatgcagctaaa
acatttcccaggcatgctcctgttcatattcttgatggaaacctgggatcatgcagtcag
ggtctttcttcagatgtatcatatcaagaacctgcatttcatcatatggggatcccagac
cagccttcattatttagcaatcctacagtttcagctgctgtagaaagccaaactagcact
tcaagatctactaatcaccaaatattccccaattcccaccctccatttagtcccttccct
aacaatcaagaaaactactcttcatttctgcagatgtcctccaccttctcaagcatgatt
gtttctgctcttctccagaatcccgctgcacatactgcagcaagttttgcagcttcattt
tggccctgtgcaatagaaaattcagccaattctactgttggaggttatccacaccgacaa
atgaacccaactcctagtgtggcagaaattgctgctgcaactgtagcagctgctactgct
tggtgggcagcacatggattgctccccttatgtactcctcctgtacatgctggcttctct
ttacctcctacctcagtaagtgctccattagctaattttggccaaactccagttgctaat
gaagaaagagaagagatcaagaactcccaagttcctgaaccacaagttcagcaatgtaat
caagaattgtctgaagctttacaaccacagcattcagcatccaaatcttcagcaacatcc
tcgcctgattctggtaatattactagtgcaaaaatggatgttgaagtggcagccgacaat
aacgaaaagaataatgtccctgcttcaagtgagcaaaaggacgcaaacaaggggaagagc
aagaaacaggtggatcgctcatcttgtggttctaacacgccgtcaggtagcgatattgag
actgatgctttgaaaaagaatgatttaggaaaagaagaagccaacgaacctgatgtcagt
cgacctactaccagtgaaccaagtagtcgccgcaatcgactcattggcaacatatatgaa
tcctggaaggaggtctccgagggggggcgcttggcatttcaagcacttttctcaagagag
gtgttaccccagagtttttcaccacctttaaatgtaactggtaagaaccaagaagtgaat
gtcactgttggtgaaaacaggaacaatgcagagaaaggctatagcggaatacagttcgat
ctcaacagcaatgcatgggaattttgctccagtaatcaaggaatagaaaatcttaaatta
agagaagaggacaatcgcaaagaagggctgctgacatttagtcttgaacatgggaatctg
aatacaacaaacagaaccggttttaagccatacaagaggtgttctgtggaggccatagaa
agcacagcgatgaactccaacgcacagcaagaaaaatgttccaagagattacgcctcgac
ggggaggcttcaacataa
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