Spinacia oleracea (spinach): 110786054
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Entry
110786054 CDS
T05137
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe00040
Pentose and glucuronate interconversions
soe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110786054
Enzymes [BR:
soe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110786054
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110786054
NCBI-ProteinID:
XP_021846250
UniProt:
A0A9R0JT85
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Position
3:9057829..9059720
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AA seq
400 aa
AA seq
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MHFLFLFLLAVLSFPLFIHSSPVSDPELTVQQVQGAINATNSNLAAASCQSGNPIDDCWR
CDENWDKNRQQLANCAIGFGKNAMGGKKGKIYVVDDPSDDAVNPKRGTLRYGVIQDEPLW
IVFATDMVIKLQQELMIRSFKTIDGRGTDVHISEGPCIVLQKVNNVIIHGIHIHDCKRGG
NAYVRKSPTGFGWRSISDGDGISIISSRNIWVDHCSLSRCTDGLIDAIRGSTAITISNNY
MTDHNKVMLLGHNDNHKQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTQWRMY
AIGGSAGPTINSQGNRFLAPDSRSNKEVTKRENAAENEWKKWNWTSEGDLFLNGARFVKS
GSGSSTPNAKAMSLSAQPASLVASMTKTAGVLKCQKSRSC
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcatttcttgtttcttttcttgttggctgtcctttctttccccctgtttattcactca
tcccctgtttctgatcctgaactaacagttcaacaagttcaaggggcgattaatgctact
aatagcaatttagccgccgcctcgtgtcagtcggggaatccgatcgacgattgctggagg
tgtgacgagaactgggataaaaaccggcagcagttggcaaactgtgccatcggcttcggt
aaaaatgctatggggggtaaaaagggtaaaatctacgtggtagatgacccgagtgacgat
gcggtcaacccaaaaagaggcacattacgatacggggtcatccaagacgaaccgttatgg
atagttttcgctacagatatggtgataaagctgcaacaggagttgatgatcagatccttc
aagaccatagatggaagaggaactgatgtgcacatttccgagggaccctgcatcgtgtta
cagaaggtcaacaacgtaatcatacacgggattcacatacacgactgtaagcgtggaggg
aatgcgtatgtcaggaaatccccgacaggtttcggttggagaagcatatcagatggtgat
gggatttccatcatttcttcaaggaatatctgggttgaccattgctctctctctagatgt
acggatgggttgattgacgctatccgcgggtctaccgcgataaccatatctaacaactac
atgacagatcataacaaggttatgcttttgggacataatgataatcataaacaagacaag
aacatgcaagttactatagcttttaatcattttggagagggacttgttcaaaggatgcct
agatgtagacatggatatttccatgtcgtgaataacgactacactcagtggcgaatgtat
gccataggaggaagtgcaggaccaactatcaacagtcaaggcaacagattcctagctcct
gatagccggtccaacaaagaggtcactaaacgcgagaatgcagcagaaaatgaatggaag
aaatggaattggacatcagaaggtgatttgtttctaaatggagcacgatttgtaaaatct
ggcagtggatcatccacgcctaacgccaaggctatgagcttaagtgcacaaccagcttca
ctggtggcttcaatgacaaagacagcaggagtactcaaatgccagaaaagcagaagctgt
tga
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