Spinacia oleracea (spinach): 110786072
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Entry
110786072 CDS
T05137
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
soe01009
]
110786072
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
soe04131
]
110786072
Protein phosphatases and associated proteins [BR:
soe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110786072
Membrane trafficking [BR:
soe04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
110786072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
110786072
NCBI-ProteinID:
XP_056694553
LinkDB
All DBs
Position
3:complement(8487714..8509601)
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AA seq
1038 aa
AA seq
DB search
MESRPSLSGRFNHEAATTSTSSSSSSPSRENSISRTSSNSSLSSKAIFEHNLSSILNNPH
SSRSSDASSWLGWWSSPTSVILPEFAPINASKPELDSNKSDFQPYLNSISEHYARFEDIR
NHSSKENLDIVDNIGGQGEALVACLREVPALYFKEDFELEDGGTFRAACPFSTMNENLVL
QERLSQYLDVVEMHLVKEISLRSNSFFEAQQQLGDLNVKIVEGCKRIRELKETIRLLEAD
VVGSARQIQEFSSMRGNLLALQQKLRLILYVDQALGALKLLVASADCAGALDVADDLRQL
LDGDELTGLHCFRHLRDHVAVSMDSIFSILSSEFMRASLHDAGDLDAIIVSTAKERASVP
SNGRLDDVKLDEEETSNFRDLVLPIIIGLLRTAKLPSVLRMYRDTLTADMKTAIKNAVAE
LLPVLVARSLESDFSTGEKTGDADGGGSSLASRLRSLTSESFVELLAAVFKIVLAHLVRA
AEVKKSIEWIMTNLDGHYASESVAAAIAHGAAASEAAQDSDNQIQVNNAIAYSSQRNSNK
VPPLQGKATELTSPSNVSKNFRADVLRENAEAVFAACDAAHGRWAKLLGVRAVLHPKLRL
PEFLSIYSITQDFINATEKIGGRLGYSIRGTLQSQAKAFVDFQHESRVAKIKAVLDQETW
SEVDVPDEFQAIVASMFTSDPLTPETFGDDQGSSIVSNNGVSTVAGHSKESNAEQHVEQT
DSNNVSDDVSTQEKSQHLGEASDASKADVVTSSALTKNNNTKDRVKSTSQTLMYRGVGYH
MVNCGLILMKMLSEYIDMNDSLPSLSSEVVHRVVEILKFFNTRTCQLVLGAGAMQVSGLK
SITSKHLALASQVISFTYAIIPDVKQILFLNVPETRKPLLQSEIDRVAQDYKVHRDEIHT
KLVQIMRERLLVHLRGLPQIVDSWNKPDDGDTQPSQFAKSLTKEVGYLQRVLSRMLHEAD
VQAIFRQVVIIFHSQISEAFSRLEISTPQAKSRLHLDVQHILGCIRSLPTDIASKSGVAN
WGHLDEFLAQRFDSEGGS
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggagtcacgaccttccctttcgggaaggttcaatcacgaagcagcaacaacgagtact
tcatcatcatcatcttcaccatcaagagagaatagtatctcaagaacaagctcaaattca
tctctttcaagtaaggcgattttcgagcacaatctctcttcaattctcaataatcctcac
tcttctcgctctagcgacgcttcatcgtggcttgggtggtggtcttcgccgacgtcggtg
attttgcccgaattcgccccgattaatgcctccaaacctgaattagattctaataaatct
gattttcaaccgtatttgaattcgatctcggagcattatgctcgatttgaggatattcgt
aatcacagtagtaaagagaatttggatattgttgataatattggaggacaaggagaagcg
ttggttgcttgtttgagagaggtgcctgcattgtactttaaggaggattttgagcttgag
gatgggggaacgtttcgggccgcctgcccattctcgacaatgaatgagaatttggtgctg
caggagagattgtcgcagtatttggatgtggtggagatgcatttggtgaaggagatctcg
ttgcggtcaaattcgttctttgaggctcagcagcagctgggggatttgaatgtgaagatt
gttgaagggtgtaagaggattagggaactgaaggagactattaggctgttggaggctgat
gttgttgggtcggcgaggcagattcaagagtttagttcaatgaggggcaacttgttagcg
ctgcaacaaaaacttaggctcatattatatgttgatcaagctcttggtgctcttaaactg
cttgttgcatctgctgattgtgctggagcattggatgttgctgatgatttgcggcaatta
ctggatggagatgagttgacaggtttgcactgctttcgtcatctgcgggaccatgttgct
gtatcaatggactccatattcagcattctttcatcagaatttatgcgtgcctctttgcat
gatgccggggatttggatgctataattgtatcgacagcaaaggaaagagcttctgtaccc
agtaacggaagacttgatgatgttaagctagatgaagaagaaacatctaatttccgagat
cttgttttaccgattataattggactgcttagaacggcaaaactaccatctgtcctgaga
atgtatcgtgatacacttactgctgatatgaaaacagcaattaagaatgctgtagcagag
ctgctaccagttctggttgctcgatctctggaatcggatttctcgactggagagaagact
ggtgatgcagatggtggaggctcgtcccttgcaagcagattaaggagcctgacatctgaa
agctttgttgaacttttagctgctgttttcaagattgtcctggcacatttagttcgagca
gctgaagtaaaaaagtcaattgagtggattatgactaatttggacggtcactatgcatct
gagtctgttgctgctgctattgcacatggtgctgcagcttcagaggctgcgcaagatagt
gacaatcaaattcaagtcaataatgcaattgcttattcttcccaaagaaattctaacaag
gttccgccactgcaagggaaggcaactgaactaacaagtccttctaacgtatccaaaaat
ttcagagctgatgtgttgcgagaaaatgctgaagctgtctttgcagcttgtgatgctgcc
cacggaaggtgggcgaagctcctaggggttcgtgctgttcttcatcccaaattacggttg
ccggaatttcttagtatatacagcatcacccaagattttattaatgctacagagaagatt
ggtggaaggttgggctatagcataaggggtacactgcaatcacaagcaaaagcctttgtt
gattttcagcatgagtcccgtgtggcaaaaatcaaggccgtgttggatcaagaaacatgg
tctgaagttgatgttcctgatgagtttcaggcaattgttgcttcaatgtttacttcagac
cctttgactcccgagacctttggtgatgatcagggtagttcaatagtgtcaaataacggt
gtgtcaaccgtggctggccatagcaaagaatccaatgctgagcagcatgtagagcaaact
gattcgaacaatgtatccgatgatgtttccactcaagagaaatctcaacatttaggcgag
gcaagtgatgcaagtaaagctgatgttgttacttcttcagccctcaccaaaaataacaat
acaaaggaccgcgtgaagtcaacttctcaaacattaatgtacaggggtgttggatatcac
atggttaattgtggcttgattttgatgaagatgttgtcagagtatattgatatgaatgat
agtttaccgtcattatcatcagaagtagttcaccgtgttgtagaaattttgaagttcttt
aatacaaggacttgccagctggttcttggcgctggcgccatgcaggtgtctggtttgaag
tcgatcacttccaaacatttggcattggcaagtcaagtcatcagtttcacatacgctatt
attcctgatgtcaagcagattcttttcctcaatgtacctgagaccagaaagccactgtta
caatcagagatcgaccgggtagcacaggactacaaagttcaccgggatgaaatacatacg
aagctggttcagataatgagagagaggctgttggttcatttgcgagggttgcctcaaatt
gttgacagttggaataaacctgatgatggtgacacacaacctagtcagtttgcaaaatca
ttaacaaaggaagttggctatcttcaacgtgtcttatctcggatgcttcatgaggcggat
gttcaagcgattttcaggcaagtggtcataatatttcattcacaaatctcagaagcattt
tcacgcttggagatcagtactccacaagcaaaatcgagacttcacctggacgtccaacat
attcttgggtgtatacgttcacttcctactgatattgctagcaagtccggtgttgcaaat
tgggggcaccttgatgaatttttggcccaaaggtttgatagcgaaggtggttcatag
DBGET
integrated database retrieval system
