Spinacia oleracea (spinach): 110786092
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Entry
110786092 CDS
T05137
Name
(RefSeq) protein EXPORTIN 1A isoform X1
KO
K14290
exportin-1
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03008
Ribosome biogenesis in eukaryotes
soe03013
Nucleocytoplasmic transport
soe03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110786092
03008 Ribosome biogenesis in eukaryotes
110786092
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110786092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110786092
03009 Ribosome biogenesis [BR:
soe03009
]
110786092
03016 Transfer RNA biogenesis [BR:
soe03016
]
110786092
03036 Chromosome and associated proteins [BR:
soe03036
]
110786092
Messenger RNA biogenesis [BR:
soe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
110786092
Ribosome biogenesis [BR:
soe03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
110786092
Pre-60S particles
110786092
Transfer RNA biogenesis [BR:
soe03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
110786092
Chromosome and associated proteins [BR:
soe03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
110786092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
Adaptin_N
mTOR_dom
Gpr1_Fun34_YaaH
Motif
Other DBs
NCBI-GeneID:
110786092
NCBI-ProteinID:
XP_021846300
UniProt:
A0A9R0JTT9
LinkDB
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Position
3:complement(8763015..8778835)
Genome browser
AA seq
1077 aa
AA seq
DB search
MAAEKLRDLSQPIDVPLLDATVAAFYGTGSKEERAAADQILRELQNNQDMWLQVVHILQT
SQNLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISDVIVQLSRDEASFRQERLYVNK
LNVILVQILKHDWPARWQSFIPDLVNAAKSSETICENCMVILKLLSEEVFDFSRGEMTQQ
KIKELKHSLNSEFQLIHELCLYVLSASQRTELIRATLSTLHAFLSWIPLGYIFESPLLET
LLKFFSVPAYRNLTLQCLSEVAALTFGEFYNAQYVKMYNVFMVQLQAILPQTTSIPDAYA
NGSSDEQAFIQNLALFFTAFFKAHIRVLEASQESIASLLVGLEYLINISYVDDTEVFKVC
LDYWNSLVLELFEAHHNVDNPAAVANMMGLQQIPFIPGMADGMGSQLLQRRQLYAGTMSK
LRLLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLTHLDHDDTEKQ
MLKKLSKQLNGEDWSWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEITKGKD
NKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKC
KRKFVIVQVGESEPFVSELLTGLPTTITDLESHQIHMFYEAVGHMISAESDPQKRDEFLR
RLMDLPNQKWAEIIGQARQSVDVLKDADVIRAVLNILQTNTSAATSLGTCFFQQISLIFL
DMLNVYRMYSELISSTIAGGGPFASKTSFVKLLRSVKRETLKLIETFLDKAEDQPHIGTQ
FVPPMMDPVLGDYARNVPDARESEVLSLFATIINKYKAAMIEDVPRIFEAVFQCTLEMIT
KNFEDYPEHRLKFFSLLRAIATHCFAALIRLSPQQLKLVMDSIIWAFRHTERNIAETGLN
LLLEMLKNFQVSEFCNQFYRTYFLTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLVQSG
AVTEPLWDAATVPYPYPNNEMFVREYTIKLLSTSFPNMTPAEVTQFVNGLFESTSELPTF
KNHIRDFLVQSKEFSAQDNKDLYAEEAAAQRERERQRMLNIPGLIAPNEIQDEMVDS
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagagaagctaagggatttgagtcagcctattgatgtccctctccttgacgct
accgtcgccgctttctatggcaccggatctaaggaagagagggctgcggcagaccagata
ttacgagaattgcagaacaatcaggatatgtggctccaagtagtacacatccttcagacc
agtcaaaacttaaatacaaaattcttcgcattgcaggttttggaaggtgtaattaaatac
cgatggaatgcattgcccgttgaacagcgggatggaatgaaaaattatatatctgatgtt
attgttcagctttcaagagacgaggcttctttcaggcaggaaaggttatatgtcaacaaa
ttaaacgtcatattggttcagattctgaagcatgactggcctgctaggtggcaaagcttc
attcctgaccttgttaatgctgctaaaagcagtgaaacgatttgtgaaaattgcatggtc
atattgaaactgttgagtgaggaggtttttgatttttcaagaggagaaatgacgcaacaa
aagattaaggaacttaagcactcgttaaatagtgagtttcaacttattcatgagttatgc
ctgtatgtgctatccgcatcccagaggactgagttgatacgggctactctgtctacactt
catgcgttcctttcatggattccgttgggatatatttttgaatcccctctgctggaaact
cttttgaaattcttttctgttccagcatatcgaaatcttaccctccagtgtttgtctgag
gttgcagcactgacatttggtgaattctacaatgcccaatatgtgaagatgtacaacgta
ttcatggttcagttacaggctattctcccgcaaacaactagtattcctgatgcttatgca
aatggatcctctgatgagcaggcttttattcagaatttggctctttttttcaccgcattt
ttcaaggctcatatcagggttctggaagcctctcaagagagcatagcttccctcttggtg
ggtcttgagtatcttattaatatatcgtatgttgatgatacagaggtttttaaggtttgc
ttggactactggaattccttggttttagagttgtttgaggcacaccataatgtcgataat
cctgcggcagttgcgaatatgatgggcctgcagcagataccatttattcctggaatggcc
gatggtatgggctctcagctcctacaaaggcggcaactttatgctggcactatgtcgaag
ttgcgtttgctaatgatttgccgaatggcaaagcctgaagaggttctgatagtcgaagac
gaaaatgggaatattgttcgcgagactatgaaggataatgatgttctagtacaatataag
atcatgagggaaacactcatatatctgacacatcttgaccatgatgatactgagaagcag
atgcttaaaaaattaagcaagcagcttaatggcgaagactggtcatggaataatttaaat
accttgtgttgggcaatcggatcgatatctggatcaatgatggaagagcaggagaacagg
tttttggtgatggttattcgtgacttgctgaatttatgtgaaattacgaaagggaaagac
aacaaagctgttattgcaagtaatatcatgtatgttgtcgggcagtacccacgatttttg
agggctcattggaaatttttgaaaacagttgtcaacaagttgtttgagttcatgcatgaa
acacatccaggagttcaggacatggcgtgtgatacattcttgaaaatagttcagaagtgc
aaacgtaaatttgtcattgttcaggttggggaaagtgagccttttgtatctgaacttctt
actggtcttccaacaacaattactgaccttgagtctcatcaaattcacatgttctatgaa
gctgttggtcatatgatcagtgcagaatctgatccacaaaaaagggatgaatttctacgg
cgcttaatggatctccctaatcagaaatgggcagagatcattggacaggcacgccaaagt
gtagatgtgctgaaggacgctgatgttattagggcagttctcaacattttgcagacaaat
acaagtgctgctacctctcttggtacttgtttcttccaacagatctcgctgatctttttg
gatatgcttaatgtgtacagaatgtatagcgaacttatctcaagtaccattgctggtggt
ggcccttttgcatccaaaacctcctttgtgaagcttttgaggtcggtgaagcgagagact
cttaaacttattgaaacattcttggataaggctgaggatcagccacacattggaacacaa
tttgttccaccgatgatggatcccgttctcggggattatgcaaggaatgttcctgatgct
agggagtctgaagtgttgtcgctttttgctactataataaacaaatacaaggctgcgatg
atagaggatgtccctcgcatttttgaagctgttttccaatgcactttggagatgataaca
aagaattttgaagattacccagagcatcgactaaagttcttttcattacttcgggctatt
gctacgcattgtttcgctgcattgattcggctgtcacctcagcaattgaaacttgttatg
gactcgattatctgggccttccgtcatactgaaagaaatattgctgaaaccgggcttaac
ctcttgctagagatgctaaagaactttcaggtttctgagttctgtaatcaattctaccgg
acttactttttgactatcgagcaagaaatatttgctgtgctgacggacacctttcacaaa
cctggatttaagctgcacgtgttggtcttgcagcatttattctgcctggtacaatctggt
gctgtcaccgaacctctttgggacgcagcgacagtcccttatccatacccaaataatgag
atgtttgttcgtgagtacaccataaagctgctaagtacttcgttcccgaacatgacccct
gccgaggttactcaatttgtcaatggactgtttgagtcaacaagtgagcttcccacattc
aagaatcacatacgggacttcttggtgcaatcaaaggagttttcagctcaggacaataaa
gacctttatgcagaggaggctgctgctcaaagggagagggaacgtcaaagaatgcttaac
attcctggacttattgctcctaatgagatccaagatgaaatggtagattcttag
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