Spinacia oleracea (spinach): 110786095
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Entry
110786095 CDS
T05137
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe04120
Ubiquitin mediated proteolysis
soe04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110786095
04120 Ubiquitin mediated proteolysis
110786095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
soe04121
]
110786095
Enzymes [BR:
soe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110786095
Ubiquitin system [BR:
soe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110786095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
FlxA
zf-ANAPC11
zf-RING_5
zf-RING_16
zf-RING_11
HR1
zf_RING_Vps8
DUF5320
CCDC138_cc
Prok-RING_4
zf-HC5HC2H
Nuf2_DHR10-like
GTP-bdg_M
Phage_GP20
zf-RING-like
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
110786095
NCBI-ProteinID:
XP_021846303
UniProt:
A0A9R0IC24
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All DBs
Position
3:complement(8823845..8830152)
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AA seq
544 aa
AA seq
DB search
MVRLKPYAGLSLFATIAVFYHAFHSRRQFYPAMVYLSTSKISLVILLNMGLVILCSLWQL
AKCVFLGRLREAEVERLNEQSWREVMEILFAITIFRQDFSVSFLAMVAALLLTKSLHWLA
QKRVEFIETTPAVPTLSHVRIVSFMGFLLFLDSLFLYSSLKSLIETKTASVSIFFSFEYM
ILATTTVAMFVKYIFYVSDMLMDGQWEKKAVCTFYLELIRDLLHLSMYLCFFMVIFVNYG
VPLHLIRELYETFRNFKIRIADYIRYRKITSNMNDRFPDATPEELDTSDVTCIICREEMT
TAKKLRCGHLFHVHCLRSWLERQNTCPTCRALVLPPETGTVTAGGPHGPHSGAHQSASTN
TPGLGSTGGTVTDIPLSGNQARLQAAAAAAAVYERSVVYPSANSLVWCPGYAVLPQVNGS
MPGSSNANSDEGEGPVGQLQHQQLMPSGETSFPYAQLPPFTASSIQVPGTEMLSEGTSHL
TVETQRNFLEHQIQMLQSQLENLQKQQGDKGASSSQSASSITNVTTTESSSDANSHTNIQ
QSNL
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggctaaagccatacgccgggcttagtttgtttgcaacaattgctgttttttat
catgcatttcatagtagaagacagttttatcctgctatggtttatctatcgacgtcgaag
attagcttagtcatacttctcaatatgggtttggttatactgtgttctttatggcaattg
gcaaaatgtgtgttccttggccggcttcgagaggctgaggttgagaggctgaatgaacag
tcatggagggaggttatggagattctgtttgccatcactattttccggcaggatttttcg
gtttcttttcttgctatggttgccgcacttttattgactaagtcattgcattggctagcc
cagaagagggtggaattcattgaaacgactccggctgtacccacattgtcccatgttcgg
attgtctcttttatgggatttcttcttttcctggatagcttattcttgtacagctcattg
aagtccctgattgagacaaaaacagcttcagtgtccatcttcttctcgttcgagtatatg
atacttgctacaacaactgtggctatgtttgtgaaatacatattctatgtgagcgacatg
cttatggacgggcaatgggagaagaaggctgtgtgtactttctacctggagcttatccga
gacctgctgcatctgtctatgtacctctgtttcttcatggtgatttttgtgaactatggt
gtacctttgcatttgataagagagctttatgaaactttccgcaactttaagattcgcatt
gctgattatattcgttaccggaagatcacttcaaatatgaatgatcgttttccagatgct
accccagaggaactggacacaagcgatgtaacctgcattatttgtcgagaggagatgact
acagccaagaaattgagatgcggacatctttttcacgtgcattgtctccgatcgtggttg
gaacgacaaaatacttgtccaacttgcagggcccttgttctacctcctgaaactgggaca
gttacagcgggagggccacatggaccacactctggtgcccatcaatctgcttctaccaat
acacctggtctagggtcaactggtggtactgtgacagacatccctttgagtggtaatcag
gctaggctacaggctgctgctgcagcagcagcagtttatgagagatctgttgtttaccct
tcggcaaattcattagtatggtgccccgggtacgctgtacttccacaagttaatggttct
atgcctggctcaagcaatgcaaattctgacgagggggaaggtccagttggacaacttcag
catcaacaactgatgcccagtggggaaacgagttttccctatgcgcagttgcctcctttt
actgcttcatctatccaagtacctggtactgagatgttgagtgagggaaccagtcatctt
actgtcgaaactcagagaaacttccttgagcatcaaattcagatgttacagagtcaactc
gagaacctgcagaaacagcagggtgacaaaggtgccagctctagccaatcagcatcctcg
attaccaatgtcacaactacggaatcatcttcagatgctaattctcacacaaatattcag
caatcaaatttgtga
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