Spinacia oleracea (spinach): 110786251
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Entry
110786251 CDS
T05137
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110786251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110786251
Messenger RNA biogenesis [BR:
soe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110786251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
AAA_11
Motif
Other DBs
NCBI-GeneID:
110786251
NCBI-ProteinID:
XP_021846476
UniProt:
A0A9R0JTF3
LinkDB
All DBs
Position
4:159650418..159655370
Genome browser
AA seq
470 aa
AA seq
DB search
MESDLGKLFIGGISWDTDESRLKEYFGQYGEVVEAVIMRDRITGRARGFGFIVFADPAVA
ERVVMDKHMIDGRTVEAKKAVPRDDQQILSRNNNMIQGSPGPGRTKKIFVGGLASTVTES
DFKTYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLHRTFHELNGKMVEVKR
AVPKEMSPGPSRSPVVGYNYGMSRASNFINNYAQGYNLNSIAGYGRLNPLVTGRAGLPPF
GNPGYGMGVNMEPGLSSSYGANSNFNNSQGYGRVLGPYYSGNSNRYNTPIGYNVGNTRGE
SLVNSTARNVWGNGSFSNPTNPPSPGAFLGSGSGNFGVSFGNSGTNWGTSPTTSQGGANG
SGYSSGNLGYGFGDSYGLGGYGRTHNTDAAPPSTFAASTGGFDSSYGDLYRGGSGYGDST
WRSSSPELDGSGSFGFGLGNAAADIASRTPEGLIGNYSASNRQANRGIAA
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggaatcagatcttggtaagcttttcattggtgggatctcatgggacacggatgagagt
aggcttaaggagtattttggacaatatggagaagtagttgaggctgtgatcatgagggat
cggattactggtcgtgcccgtggctttggttttattgtctttgctgatcctgctgtggcg
gagagagttgtgatggacaagcatatgatcgatggccgaacagtcgaagcaaagaaagca
gtcccaagggatgatcagcaaattctgagcagaaacaataatatgatccaaggatctcct
ggtcctggacgtaccaaaaagatatttgtaggaggtttagcttcaacagttacagagagt
gacttcaagacgtactttgatcagtttggtatcattacagatgttgtggttatgtatgat
cacaacacccaaaggccaagaggttttggtttcattacttatgactcagaagaggctgtc
gatagggtattgcatagaactttccatgaacttaatggaaaaatggttgaggttaagcgg
gcagtaccaaaagagatgtctccaggccccagtcgcagccccgtagtaggatataattat
ggcatgagtagggcaagcaacttcattaataactatgctcaaggttacaatcttaactct
attgcaggatacggtagacttaatccacttgttacaggtcgggctgggcttcctccgttt
ggtaatcctggatatggaatgggagtgaatatggaaccaggattgagttctagctatggt
gccaactctaatttcaacaacagccagggttatggtcgtgttttgggaccttattatagt
ggtaactcaaacaggtataatactcctattgggtataatgtgggtaatacaagaggtgaa
tctttggttaactcaacagcgagaaatgtctggggaaatgggtcttttagcaatcctaca
aatccccccagtcctggtgcttttctgggatctggaagtggaaactttggggtttcattc
ggaaatagtggaaccaactggggtacatctcctaccacatcccaaggtggagctaatggt
tctggatatagtagtgggaatcttgggtatggttttggtgatagttatgggttaggaggt
tatggaagaactcataacactgatgctgctccaccgtctacatttgctgcatcaacaggt
ggttttgattcatcttatggcgacctataccgtggtggttcagggtatggtgattcaaca
tggcgttctagttctcccgagcttgatggatctggttcatttggctttggtctaggcaat
gcagctgcagatattgcttctagaactcctgagggtctaattggaaactatagtgcatca
aatagacaagcaaatagaggtattgctgcatag
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