Spinacia oleracea (spinach): 110786273
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Entry
110786273 CDS
T05137
Name
(RefSeq) crossover junction endonuclease EME1B isoform X1
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03440
Homologous recombination
soe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110786273
03460 Fanconi anemia pathway
110786273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soe03400
]
110786273
DNA repair and recombination proteins [BR:
soe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
110786273
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
EME1-MUS81_C
AAA_13
Fungal_lectin
Motif
Other DBs
NCBI-GeneID:
110786273
NCBI-ProteinID:
XP_021846501
UniProt:
A0A9R0IC18
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Position
3:122189085..122202113
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AA seq
662 aa
AA seq
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MSQPEPIVLSDSDDDDEYKLKEIHSTTPISILSKEIHLTTPISNFNKEIDLITPISNKRP
RKVPVLIDLIDDPTPPPPKLQKSASSTKSFIPETPIFVDDSPVTKFTANLPSPSNSPALI
SSGVDKSDNDAGDSEMGTCVKNMQASPSSDSENESVREFDLESWLDIDSTFCLHKGEESN
VHMEGRGLGKKCSMENGRTLSELNVEQNLEKRPKVVEKENCQENERIPVTSNVKTLEKCP
IVQSTCCLGNLKSTKTHDHTSLEYNTNQVQPINDHDCGKENVRLKKGGAIHKPKSGGDAN
AKKKLNKDDQAADRKKLMEEKRALKEQEKSLKADLRAEAAKQKQLEKEKKKLENYKFNEK
DIVAEIDPKVLSGSLGGRPGPLLTMFNEKGLNYKINPNPVEKSIIWRFILPENTFQHSAV
KPDIRYILLIYDDAEEFCNRANDGSLMVHISSVRKRYPSYTICCLTNRLMSFINKREQQK
YKKQKVASDWIRPPVEELFAKLTTQFANVHSRQCVDEAEVAEHVVGLTINLAKGQSRKKL
THLSVNANGCNVTRDCVDRSLIMKHPWLKALVSIPKVQPRFAIAIWKKYPTMKSLLRVFM
DPTKTVDDKELLLQDLPLEQISGGEKRLGVICSKRVYRILMAQNGSITTDDAANGADYFP
SQ
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagcctgaacccatcgtcctcagtgactctgacgatgacgacgaatacaagctc
aaagaaattcattcaacaactccaatttcgattttgagcaaagaaatacatttaacaact
ccaatttcgaatttcaacaaagaaattgatttaattactccaatttcgaataagagaccc
agaaaagtccctgtgttaattgatcttatcgatgacccaactcctcctcctcctaagctt
caaaaatcagcatcttctacaaaatcatttatcccagaaaccccaattttcgttgatgat
tctcctgttaccaagtttaccgctaatttgcctagcccctcgaatagtcctgctctcatt
tcatcaggtgttgataaatctgataatgatgctggagactctgaaatgggaacttgtgta
aaaaatatgcaagcatctccgtcttctgattcagaaaatgagtcggtacgtgagtttgat
cttgaaagttggttagacattgactcaaccttttgtcttcataagggagaggaatccaat
gttcatatggagggtagaggtctaggaaaaaaatgttcaatggaaaatggaagaactttg
tctgagcttaatgtggaacagaacttggaaaagagacctaaagttgtagaaaaggagaac
tgccaggagaatgaaagaattcctgttacttccaatgtgaagaccctggaaaagtgtccc
attgttcagtccacgtgctgtcttgggaacctgaaatccacaaagacacatgaccatact
tctctggaatacaataccaatcaagtacaacctattaacgatcatgattgtggaaaagaa
aatgtcagactgaaaaaaggaggtgcaatccataagccaaaaagtggaggtgatgctaat
gcaaagaaaaaattgaacaaagacgatcaggcagcagataggaagaaattaatggaggaa
aaaagggctttaaaggagcaagaaaagtcacttaaagcagatttgagggctgaagctgct
aaacagaaacagctggagaaagagaagaagaaattggagaactataagttcaatgagaaa
gacatcgtggctgaaattgatccaaaggttctgtcaggatcacttggaggtaggcccggt
cctctgctaacaatgtttaacgagaaaggtctcaattataaaataaatccaaatcccgtc
gaaaaatcaattatttggagatttattcttccagaaaatacttttcagcattctgcagtg
aaaccagatattcgatatatattgctcatttatgatgatgctgaggaattttgtaaccgt
gctaatgatggatctcttatggttcatatttcttctgtgcgaaagcgttatccatcttac
acaatctgctgcctcacaaataggttgatgtcttttatcaataaaagggagcagcagaag
tataaaaagcaaaaggttgccagtgattggatacgcccacctgtggaagagctttttgca
aagttaaccactcagtttgccaatgttcattcaagacaatgtgttgatgaggctgaagta
gctgagcatgtcgttgggttgacaatcaaccttgccaagggccaatctcgcaagaagctg
acacacctatctgttaatgccaatggatgtaatgttacaagggattgtgtggacagaagc
ctcataatgaagcatccatggttaaaggcattggtttctataccaaaagtgcaacctcga
tttgctatcgctatatggaagaagtatccaactatgaaatctctcttgcgagttttcatg
gatccaactaaaactgtggatgacaaggaattattactccaagatctgccactagaacaa
atatccggcggtgaaaaaaggcttggcgtaatatgttcaaagagagtgtataggatactc
atggcccaaaatggaagcatcaccactgatgatgctgcaaacggtgctgattatttcccc
agtcagtaa
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