Spinacia oleracea (spinach): 110786295
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Entry
110786295 CDS
T05137
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 1
KO
K03255
protein TIF31
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
soe03012
]
110786295
Translation factors [BR:
soe03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
110786295
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_10
TPR_12
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_MalT
TPR_9
TPR_8
CLU
Motif
Other DBs
NCBI-GeneID:
110786295
NCBI-ProteinID:
XP_021846533
UniProt:
A0A9R0JTZ7
LinkDB
All DBs
Position
2:107087296..107102949
Genome browser
AA seq
1861 aa
AA seq
DB search
MAPKNGRGKSKGDKKKKEEKILPVVMDITVSLPDDTSVVLKGISTDRIIDIRKLLSVNTI
TCNITNFSLSHEVRGPRLKDTVDIAALKPCTLTLVEEAYDKETAAAHVRRLLDIVACTTS
FGPSASTKDGTKIEDAKNARGAQDKSSSAKKSGNKPNCGKQPAVVVEEFTVKSLNSAALS
SPKDDVSMMIDGEGETNNSCPKLGSFYEFFSLAHLSPPLQFIRRASKQTDDQILEDDHLF
FMDVKLCNGKVVLVEVCKRGFISIGKHRVLSHNLVDLLRQISRAFDNAYDELMKAFSERN
KFGNLPYGFRANTWLIPPSATHSLSTFPPLPVEDESWGGNGGGWGRNGKSDLIPWANEFR
FVASMPCKTPEERQIRDRKAFLIHSLFVDVAIFRAISTLQHVMEKTIVTEATVNDEIIHT
EKVGDLHITVMKDVSLASFKLDTKIDGLRATGLDQKALTERNLLKGITADENTAAHDIGS
LGSVNLRYAGYVVTVKVEVKEDAPVDSLSPSIETFDQPEGGANALNINSLRLLLHKGAAT
DNQKWATQSEQSENRRLNTSQTFVEKLLEDSLSKLQEENTKQDNCVRWELGACWIQHLQD
QKNTEKDKKPSAAKAKNDMKVEGLGTPLRSLRNKKSEGISQVHSDKEPSNSSSADVSSTE
AQSGTSHSESELALKRILSDAAFTRLKESDTGLHQKSLQELIDLSQKYYDDVALPKLVAD
FGSLELSPVDGRTLTDFMHTRGLRMNSLGRVVKLSEKLSHVQSLCIHEMIVRAYKHILQA
VIASVGNEDVAVTVASALNFMLGVPETGDSEKSYNVHSLVWRWLELFLVKRYDWDINGFS
FKDLRKFAILRGLCQKVGLELVPRDYDMSSPNPFRISDIVSLTPVHKQAACSSADGRQLL
ESSKTALDKGKLEDAVNYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIY
QQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPN
TAATYINVAMMEEGLGNVHVALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLMEAY
PLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGTRKPDASIASK
GHLSVSDLLDYINPSPDTKGRNSMSVKRKSYFVKVQEKANQASSKPSSESSPKETTPIIS
EGDNEPEGIIGEAESDVTSDAAKLTDSTLEPVQPVVPVREPAHVKQPFTLSKVPPETNIE
AEDGWQPVQRPRSAGGHSRRVRQRRATIGKVYGYQKKEVVETDPSRLNNSIQNANYYVLK
KRALSPASYTDQQNAKNASQVSKFGRRIVKAVTYRVKSVPSSTKDESREVSSRESESVQI
HEKPTIVRLGKSPSYKDVALAPPGTISKLQASVTQSDICEDTVSSDLRENVASENADVEV
DIVKEVNEGSLSNSKESSPGHQDMEENQSVGVARNVDTSVDKAESDTIDIHEVVPENEPV
KKMTTNSTSASNDVKFEIDISCGSQTEHNAASPVQGEEHLEDKRMVANFSDALDIPSKKL
SASAAPFNPSPTNPRSAPLPLNMNLPSGPGAVPAVGPWPMNMTLHPGPATVMPAVNPMCS
SPHHPYPSPPTTPNIIQQVQFMYPPYSQAQPVPPNSFPPNGNHYHRNHYVWQCNMNPGTI
WRPVEFSVIPPVSEPICEPVSEQRAQSPNSDSSQGLAPLLPDDIGSVEEAKKEVVLPIAE
VVHDTDKLACIGLENKKQKEDPASCVDKDSNGTTLACDDSPNEKSEDSAEVTKSDHLVED
DERTFSILIRGKRNRKQTLRVPISLLRRPHCSQSFKIAYSRVVRESETSRPLSSCESNVA
T
NT seq
5586 nt
NT seq
+upstream
nt +downstream
nt
atggcacccaaaaatggaagaggaaagagcaaaggagataagaagaagaaagaagagaaa
attcttccagtcgttatggatatcacagtgagccttcccgatgacacgagtgtagttttg
aagggaatatccacagatagaattatcgacattcgaaagcttctctcagtgaatacaata
acttgcaacatcactaatttctccctatcgcacgaggtccggggcccacgtttaaaagac
acggtggacattgcagctcttaaaccctgcactcttacactggttgaagaggcgtacgat
aaggagaccgcagcggcgcacgttagaaggctactcgacattgttgcctgtacaacgagc
ttcgggccttctgcaagcaccaaagatggaaccaaaatcgaagatgctaaaaatgcgcgt
ggtgcgcaggataagtcctcatcggcgaaaaagtccggcaacaagccgaactgtggcaaa
caaccggcggttgtggtggaggaattcaccgtaaaatcgttgaattcggcggcgttgtct
tctcctaaagatgatgtttcgatgatgattgacggagagggagagacgaataattcgtgc
cctaagcttggtagcttctacgagttcttctctctcgctcatctctctcctcctcttcag
tttatacggagggcttcaaagcagaccgatgatcagattttagaggatgatcatttattt
ttcatggatgttaagctgtgcaatggcaaggtggttctcgttgaggtttgtaagcgaggt
ttcatcagtattggaaagcatcgtgtcctcagtcacaaccttgttgatctgctgagacaa
atcagtagagcttttgataatgcatatgatgagctcatgaaagcattctcggagcgcaac
aagtttggtaacctgccttatggcttcagggccaatacatggctcattcctccgtctgca
acacattcactttctacattcccccctcttccggtagaggatgaatcttggggtggcaat
ggcggtgggtggggaagaaatggaaaaagtgatttgataccgtgggcaaatgaattccgt
tttgttgcatcaatgccttgtaagactcctgaagagaggcaaatacgagatagaaaggct
tttcttattcatagcttgtttgtagatgtagcaatttttagggcaatttctaccttgcaa
catgtaatggagaaaacaattgtgactgaggcaactgtaaatgatgagattattcatact
gagaaagttggtgatttgcatatcactgtcatgaaggatgtttctcttgctagctttaag
ctggacactaagattgatgggcttcgtgccactggtttggatcagaaggctttaacagag
aggaacctgctaaaaggaataacggcagatgagaatactgctgctcatgatatcggcagt
ttaggctctgttaatctgaggtacgctggttatgttgtcacggtgaaggttgaagtcaaa
gaggatgcacctgtggattcattgtcacctagcatagaaacttttgatcagcctgaaggt
ggtgctaacgcactcaatattaacagtttaagacttttgcttcataaaggagcagctaca
gacaatcagaaatgggcaactcaatcggaacagtcagagaatcgaagactcaacacatct
caaacttttgtggagaaactattggaagacagtctttccaagcttcaggaagagaacaca
aagcaagataattgtgtgagatgggagctaggggcatgttggattcaacatcttcaggac
caaaagaatacagagaaagacaagaaaccctctgctgcaaaggctaagaatgacatgaag
gtcgaggggttgggaacaccccttagatccctcaggaacaagaaatcagaagggatttct
caagtacattctgataaagaaccttcaaattcaagcagtgctgacgtgtcatctactgaa
gcacagtccggtaccagtcacagtgaaagtgagcttgcgctcaaaaggattttgtcagat
gcagctttcactcgtttaaaagaatcagatacaggattgcaccagaagtctttgcaagaa
ctgattgacctctcgcagaaatattatgatgatgttgctctgcctaagctggtagcagat
tttggctcattagaactctcacctgttgatggacgaacattaaccgattttatgcataca
agaggtctgcggatgaattctctcggacgtgttgtgaagttgtcagagaagctctctcat
gtgcagtctctctgtatccatgagatgattgttcgagcctataagcacattctccaagca
gtgattgcttctgttggtaatgaagacgtggctgtgactgttgcttcagctttaaatttt
atgctgggggttcctgagactggtgattcggaaaagtcatataatgttcattccctggta
tggagatggctggagttattcttggtgaaacgatatgactgggatatcaatggttttagc
ttcaaagacctaagaaaattcgccattctacgtggactttgtcaaaaggtgggtcttgaa
ttggttccgagggattatgatatgagctctcccaatcctttccgcatatcagacatcgtt
agcctgacacctgtccacaagcaagcagcatgttcatctgctgatggcaggcagcttttg
gagtcgtcaaaaacagctctagataaaggaaagcttgaagatgcagttaattatgggaca
aaggctctagcaaagctggttgcagtttgtggtccctatcaccggatgactgcaggagct
tacagtctccttgccgtggtgttgtatcatactggagattttaaccaggctacaatttac
cagcaaaaagctttggacatcaatgagagggaactgggactcgatcaccctgacacaatg
aaaagctatggagatttagctgttttctattaccgccttcagcatacagagctggctctt
aagtatgtgaagcgtgcattgtatctattacatcttacatgtggtccatctcatccaaat
actgctgccacgtatattaatgtggctatgatggaggaaggcctcggaaatgtgcatgtt
gcccttagatatctccacaaggctctgaagtgtaaccaaaggttacttggaccagatcac
attcagacagcagcaagttatcatgccattgctattgcactttcgttaatggaagcctat
cctctgagtgttcagcatgagcagacaaccttgcaaattcttcgggctaagctagggcct
gatgatttacgcactcaggatgctgctgcttggcttgagtattttgaatccaaggctttt
gaacagcaagaagctgccagaaatgggaccaggaaacctgatgcttccatcgcaagcaaa
ggtcatctaagtgtctcagacttgcttgactacataaatccaagtcctgatacgaaaggg
agaaattcaatgtcagtcaagagaaaaagctattttgtgaaggtccaagaaaaagcaaac
caggcttccagcaaacccagctccgagagttctccaaaagaaacaacccccattatttca
gagggagataatgaacctgaaggtattattggtgaagctgaatctgatgttacatctgat
gcagcaaaattgacagatagtactttagagcccgttcagcctgttgtgcctgtgcgtgaa
cctgcacatgtgaagcagcctttcactttgagtaaagtcccacctgaaaccaatattgaa
gctgaagatgggtggcagcccgtccaacggccaagatcagctgggggacatagtcgtcga
gttagacagcggcgtgcaacaattggcaaagtatatggttatcagaagaaagaagtcgtt
gaaaccgatccatccagacttaataattcaatccaaaatgctaactattatgtgttgaag
aaacgtgcattgtcacctgctagttacacggatcagcagaatgcaaaaaatgcctcccaa
gtcagcaaatttggacgaagaattgtcaaagctgtgacttacagggtcaagtctgtgcct
tcctctaccaaagatgaatcaagggaggtttctagcagagaaagtgaatctgtacaaatt
catgaaaagcccacaattgttaggctgggtaaatctccttcctataaggatgttgcactt
gcacccccagggaccatctctaaactgcaagccagtgttacccaaagtgatatatgtgaa
gatactgtgagcagtgatttaagagaaaacgttgcctctgaaaatgcagatgtcgaggta
gacattgtgaaagaggttaacgagggttctctgtcaaattctaaagagtcctcaccaggt
catcaggatatggaagaaaaccaatctgttggtgtagcaagaaatgttgatacttctgtt
gacaaggcggaaagtgatacaattgacatccatgaagtggtgcctgagaacgagcctgta
aaaaagatgacaacaaattcaacaagtgcttcaaacgatgtgaagtttgagatcgacata
tcttgcggctctcaaacagaacataacgcagcctctccagtacaaggagaagagcatttg
gaggacaaacgaatggttgcaaatttcagtgatgcacttgatattcccagcaaaaagttg
tctgcttctgctgcaccatttaacccgtcaccaactaatccacggtctgctcctttgccc
ctgaacatgaatcttccttctggtccaggcgctgttccagctgtaggtccttggcctatg
aacatgactctccaccctggacctgctacagtaatgccagctgttaatcctatgtgctcc
tcacctcaccacccatacccgtctccaccaactacaccaaatattatacaacaggtgcag
ttcatgtatcctccttacagccaggctcagcctgtaccaccgaacagctttcctccaaat
ggaaatcattatcatcgcaatcattatgtatggcaatgcaacatgaatcctggcaccatt
tggcgcccagttgagttctctgtaattccacctgtgtctgaaccaatctgtgaacctgta
tcagaacaaagggctcaatctccaaactccgacagcagccaaggtttggcccctcttctg
cctgatgatattggtagtgttgaggaggcaaagaaagaagtggtgcttccgatagcagaa
gtggtacatgatacagataaattggcttgtattgggttggagaataagaagcagaaagag
gatccggcttcttgtgtggataaggatagtaatgggacaacactggcatgtgatgacagt
cccaacgaaaagtcagaggatagcgctgaggttactaagtctgatcatctagtggaggat
gacgaaagaactttcagcattttaatccgaggaaaaagaaacagaaaacaaactctaaga
gtgccgataagcttgcttagaagacctcattgttcacagtcattcaaaattgcatacagc
agagttgtgcgagaaagtgaaacttctaggcccttgtcatcttgtgaaagcaatgtagca
acatga
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