Spinacia oleracea (spinach): 110786470
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Entry
110786470 CDS
T05137
Name
(RefSeq) protein CHROMATIN REMODELING 35-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110786470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soe03400
]
110786470
DNA repair and recombination proteins [BR:
soe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
110786470
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWI2_SNF2
AAA_16
Motif
Other DBs
NCBI-GeneID:
110786470
NCBI-ProteinID:
XP_021846718
UniProt:
A0A9R0ICG1
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Position
4:complement(174066022..174071737)
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AA seq
830 aa
AA seq
DB search
MHSRMGGENIESEVLKSRCHRSVRVLRATIIRGKKMKQMQPSRLMTLGHVQAVVNHGTTE
FSDPITAMQKHSRLLRMSVLREKRMGLHPRTDSRIGSSQQISYPLFVDRNKLITGEETGG
RNPSPITSSQAEVKHASPEVTKGTYIGVEEDTATQDESEIDDEDDAATIWKKMEFAMESC
KEFPENHLSDEDEKEEEDDCDHSFILKDDIGYVCRVCGLVQKGIQDMFEFLYPKRTRTKS
CYRNESQNIEDNKLDDALPDWCKLLNMDLAVTEVLAHADHIKQMKPHQIEGFNFLLRNLV
TENPHGCILAHAPGSGKTFMMICFMQSYLAKYPSARPLVILPKGILGTWKKEFHRWKLDD
IPLHDFYSMKAANRSQQLNVLKQWAQQKSILFLGYQQFSSIVTGDVTSKEKAACKEILVR
VPTVLILDEGHTPRNKNTDMLQSLTQVQTPRKVVLSGTLYQNHVIEVFNILNLVQPKFLK
LERSRAIVRRIMSKVKISGVRKQLTGTGDSSFYDLVENTLTNDDNEQRKVGIIKDLREMT
SHVLHYYKGDSFDELPGLVDFTVLLNLSPKQKTEVDEMKKLKERKFRSSSLGSAIYLHPQ
LKKFSGSNNDSTNESKILSDEKLDQMISKMNLIDGVKAMFFLNVVRLCEIAKEKLLVFSQ
YLLPLKFLERLAVHQMGWNISKEIFMITGETTAEHREWSMEQFNSSPNAKVFFGSIKACG
EGISLVGASRILILDVPPNPSVSWQAVCRAFRPGQLKKVFTYRLVAADSPEEDDHKTCFK
KEIIAKMWFEWDEFTKKEDLELESVDLDDCCDIFLQNPQLRKDVKALYKR
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgcatagcaggatgggcggtgagaatattgaatctgaagtcttaaagtcaagatgtcac
agaagtgttagagttttgagagcgacaataattcgtgggaagaagatgaagcaaatgcaa
ccttcaaggttgatgactttgggtcatgttcaggcagttgtcaatcatggaactactgaa
tttagtgatccgattacagcaatgcaaaaacattccaggcttctgagaatgtcagttcta
cgtgaaaaacggatgggtttgcatcctcgtactgattccaggattggaagcagtcagcaa
attagttatccattgttcgttgacagaaacaaattgatcactggagaagaaacaggaggt
agaaacccaagccccataacatccagccaggcagaagtcaaacatgcttctcctgaagtc
accaaaggaacatacataggggttgaagaagatactgcaactcaagatgaatccgaaatt
gatgatgaagatgatgcagccactatatggaagaagatggaatttgcaatggaatcttgc
aaggaatttcctgagaatcatctttctgatgaagatgaaaaggaagaggaagatgactgt
gaccattcttttatcttgaaggatgatattggttatgtttgccgtgtgtgtggacttgtg
caaaagggaatacaggatatgtttgagttcctttacccaaagcgaacaagaacaaagtct
tgttaccgaaatgaatcccagaacatcgaagataacaagctagatgacgctcttcctgac
tggtgtaagctactgaacatggatcttgctgtaactgaagttttagctcacgcagatcac
attaaacagatgaagccacatcaaatagaaggcttcaattttctgcttagaaatttggta
actgagaatccgcatggttgcattctggctcatgctcctggctccggaaaaacattcatg
atgatatgtttcatgcaaagctatctcgctaagtacccttctgctagaccattagtaatc
ctccccaaaggaattctgggcacatggaaaaaagaatttcataggtggaaactcgatgat
attcccttgcatgatttctactctatgaaggcagccaatcgttcacagcagctgaatgtt
ttgaagcaatgggcacaacagaagagcattctctttttagggtatcagcagttctcttcc
attgtcacaggtgatgttactagcaaagaaaaggctgcttgtaaagagatattagtgaga
gttcctacagttctgatattggatgaaggccacacaccgaggaataaaaatactgacatg
ttgcagtcacttacccaagttcagacacctcggaaagttgtactttctggcacgctttat
cagaatcatgtcatagaagtcttcaacattcttaacctagttcagccaaaatttctgaag
ttagaacgtagtcgtgcaatagttaggcggattatgagcaaagttaagatttctggggtc
agaaaacagttgacaggaacaggggattcttcattttatgacctggtggagaatacacta
actaatgatgataatgaacaaagaaaagttgggatcataaaagatttacgtgagatgaca
agccatgttcttcactattataaaggggattcttttgatgaattaccaggactggtggac
tttacggtcttgctcaatcttagtcctaagcaaaagactgaagttgatgagatgaagaaa
ttgaaggaaagaaagttcagaagtagttctttagggagtgctatatatttgcatccgcag
ctgaagaagttctcaggaagcaacaatgatagtacaaatgaaagtaagattttaagtgat
gagaaactggatcaaatgatcagtaaaatgaatctaatcgatggggttaaagccatgttc
ttccttaatgtggtacgtttatgtgaaattgcgaaagagaagttgttagttttcagtcag
tatcttctgccattgaagttcttagaaagattagcagtgcatcagatgggttggaatatc
agtaaggagatattcatgataacaggtgaaacaactgcagaacaccgagaatggtccatg
gaacagtttaacagctcgcctaatgctaaggtgttttttggatcgattaaagcttgtggg
gaaggaatatcacttgttggagcatcgcgtattttaatacttgatgttcctccaaatcct
tctgtgtcttggcaagcagtatgccgggcattcaggccaggacagctgaaaaaggtgttt
acttacagactggttgcagctgattctcctgaagaggacgaccacaagacttgtttcaag
aaagagattatagcaaaaatgtggtttgaatgggatgaatttaccaaaaaggaggatttg
gaacttgaatccgttgatttggatgactgttgtgatatcttcctgcagaatccacagcta
aggaaagatgtaaaagctttgtacaaaaggtaa
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